Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0156 ATGAATCTTGCGTCAGGCTTCTCTTCTTTCATTTTTACATTGCTAATACTTCATTTTGAAGCTGGCAAAGCCACCGATTGCAGAGGCCCTCTCAAGACCATAACAGTGAGTCAATCAGGGAAAGCACAGTTCAAAACCATTCAAACGGCAATTGACTCTGTCTCTAACAAAACGCAAAACACTAGATGGATTCGCATCAAGATTCTTCCTGGAGTTTATAGACAACAGGTCATAATCTCCATACTTCAGAGTTGCATATATCTAGAAGGAGCCGGTAGCAAGCTAACCTTTGTGCAGTGGAATGGCCACGACACACCATTTACCACTCCTACTTTGATTTCAAGAGCAGATAATATTGTCGCAAAGGGCATTACTTTCATGGAATGCACCCTGTTCTTTTCAGTGGTACAAGATCTTCCCAAGGGAAGGGGTGGTGTTTTCACTGCAAACAAAAGGGATTCAGAAGAAGATCCAAGCGCGTTTGTGTTCAACAAATGTAACATATCTGGGGATGGAGAAGCAAATGTAACATATCTGGGGATGAAACATTTTAGGGGAAGCGCCCTTCGCCGATTCGTGGATAAGACCTTCATCGACCCACAAGGATGGATCGCAAAACTTCCAGTGAAGCCTTCCTAA 639 0.4335 MNLASGFSSFIFTLLILHFEAGKATDCRGPLKTITVSQSGKAQFKTIQTAIDSVSNKTQNTRWIRIKILPGVYRQQVIISILQSCIYLEGAGSKLTFVQWNGHDTPFTTPTLISRADNIVAKGITFMECTLFFSVVQDLPKGRGGVFTANKRDSEEDPSAFVFNKCNISGDGEANVTYLGMKHFRGSALRRFVDKTFIDPQGWIAKLPVKPS 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0156 212 Pfam Pectinesterase 34 127 IPR000070 GO:0030599|GO:0042545
Lele08g0156 212 SUPERFAMILY Pectin lyase-like 32 182 IPR011050 -
Lele08g0156 212 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 28 127 - -
Lele08g0156 212 Gene3D - 129 206 IPR012334 -
Lele08g0156 212 Gene3D - 30 128 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0156 Lele-ChrLele08 967492 968679 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g0156 7 126 Carbohydrate Esterase AT2G19150 35.772 8.32e-15 69.7