Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0143 ATGATAGGGCAGTCTGCAGCAAATCGAAGTGAAGACGATATGTGCGTGAGGAAAGGTCCATGGACTGTTGAAGAGGATACCATTCTCGCCAATTACGTGGCCCTTCATGGTGAAGGTCAGTGGAATTTTGCCGCTCGCTGTTCAGGTCTGAATAGAACGGGCAAGAGTTGCAGATTGAGATGGCTGAACTACTTGCGTCCCGGTGTTCGGCGTGGAAACATCACACTCCAGGAGCAGATATTGATTCTCGACCTCCATTCTCGCTGGGGAAATAGGTGGTCCAAAATTGCGGAGCATTTGCCAGGAAGAACAGACAACGAGATAAAGAATTATTGGAGAACCAGAGTGATAAAGCAGGCGAAGCAGCTCAAGTGTGACGTCAACAGCAAACAGTTCAGAGACGCCATGCGTTACGTGTGGATTCCCCGCTTGGTGGAGCGGATTCGGGCCTCGTCCGAAGATCGACACGGTTCGGGAACAGAGTGGAGGAGACCCGATTACTCTTGCACCCCTCCCTATGCGGGATCGGAGCTCCAAGTGGCTTCGAATTCAGACAGCAGCGAAACATCGGGTCATCCAATAGGAAACGGGTCGGTGACCCAGACAGTAGAGCAGGGAGACGCACCGGAGAATCTATGGAGCGACGAGAATATATGGTTTTTACGGGAACAACTTCGTGATGAGTTCTGA 690 0.5145 MIGQSAANRSEDDMCVRKGPWTVEEDTILANYVALHGEGQWNFAARCSGLNRTGKSCRLRWLNYLRPGVRRGNITLQEQILILDLHSRWGNRWSKIAEHLPGRTDNEIKNYWRTRVIKQAKQLKCDVNSKQFRDAMRYVWIPRLVERIRASSEDRHGSGTEWRRPDYSCTPPYAGSELQVASNSDSSETSGHPIGNGSVTQTVEQGDAPENLWSDENIWFLREQLRDEF 229
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0143 229 Gene3D - 19 70 - -
Lele08g0143 229 MobiDBLite consensus disorder prediction 177 201 - -
Lele08g0143 229 Pfam Myb-like DNA-binding domain 71 114 IPR001005 -
Lele08g0143 229 Pfam Myb-like DNA-binding domain 18 65 IPR001005 -
Lele08g0143 229 SMART sant 70 118 IPR001005 -
Lele08g0143 229 SMART sant 17 67 IPR001005 -
Lele08g0143 229 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 13 65 IPR017930 -
Lele08g0143 229 SUPERFAMILY Homeodomain-like 16 112 IPR009057 -
Lele08g0143 229 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 15 187 IPR044676 GO:0003700|GO:0006355|GO:0043565
Lele08g0143 229 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 120 IPR017930 -
Lele08g0143 229 FunFam MYB transcription factor 75 138 - -
Lele08g0143 229 ProSiteProfiles Myb-like domain profile. 17 65 IPR001005 -
Lele08g0143 229 FunFam Myb transcription factor 18 70 - -
Lele08g0143 229 ProSiteProfiles Myb-like domain profile. 66 116 IPR001005 -
Lele08g0143 229 CDD SANT 20 65 IPR001005 -
Lele08g0143 229 CDD SANT 75 114 IPR001005 -
Lele08g0143 229 Gene3D - 75 116 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele08g0143 Lele-ChrLele08 877561 878524 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g0143 11 225 MYB Transcription Factor Family AT2G47190 51.807 1.76e-76 230
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele08g0143 Myb_DNA-binding 8.6e-15 CL0123