Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0132 ATGGATGACTGCTGTGCCGTTTGCGCCGAAACTTTGGAATGGGTTGCTTACGGTCCCTGTTTGCATCGGGAGGTTTGCTCAACCTGCGTAGCTCGTCTCCGTTTCATATGTGACGATCGCCGTTGTTGCATCTGCAAGACCCAGTGCGACCGTGTTTTTGTCACAAAGGCTCTAGGAGATTTTACAAGGATGATTAATAACTTCTCGGTGCTGCCATCAGATGTAAGGGAGGGTCAGGTGGGTTCATACTGGTACCATGAAGATACAAATGCTTTTTTTGATGATATGGACCACTACAAGATGATCAAAGCTATGTGCAAGCTCTCATGTAGCGTATGTGACAAGATGGAGGAGCAAGCACCTGATGCCCCAAAGCGTCGAGCAAGGTTTCGGAATATAGAACAGCTAAAGGGTCACTTGTTCCGCTTTCACAGGTTGCTCATGTGCAGTTTATGTTTGGAAGGAAGGAAGGTATTCATTTGTGAACAAAAGCTGTATACTAGAGCACAGTTAAATCAGCATATATGCACAGGTGATTCGGAGGTGGATGGAAGTGAGAGTGAGAGAGGTGGTTTTATGGGGCATCCCATGTGTGAATTCTGCCGAACCCCATTTTATGGGGACAATGAACTATACACTCATATGTCAACGGAACATTTTACTTGTCATATATGCCAAAGGCAACATCCAGGACACTATGAATATTATAAGAATTATGATGACTTAGAGACCCACTTCCGTCAAGAGCACTTCTTATGTGAAGATGAAGCTTGCCTTGCTAAAAAGTTCATTGTATTTCAATCTGAAGCAGAGATGAAGAGGCACAATGCTATTGAACATGGAGGGCGAATGTCAAGGTCAAAACGTAATGCTGCTCTTCAGATTCCAACTAGCTTCCGATACAGACACGGTAATCAACAAGATCAAAGGCGTGGAAGAGGTCGGACATTTCGTCGTGATCTTTCTGAAAGTGAACTTTCTATGGCCATTCAAGCCAGTTTTGACACAGCTAGTGTAGAGAGCACTAGTCATGATCCAGCTACATCAAGCAGTGGAGAAGTTGCTCTTGGTTATGGAAACTTTGATAATGAGCCAGGCATCCAATCATCTGAATCCTTAGCTACATCAAGTTCTGAATTGTCTTTAAGATACCTCCAAGCCTTGGGACATTCAAGAAGTTCACCAATGGGAGATTCCTCCTTTCCTCCACTTCCCATAGCATCGATCAATGGCCAAGCAAACCCCAAGAACGAGCCCGAAGCTTCATCTAGTAACACTATGGCGGCACATTTGCGTCGGCATAGCAACATAAATGTATCTGCTCTTAATTCTGCTAATGGATGGCGAGTTGCAAGTCGTGGATCTGTGCAATCATCAAGTAATCCTATGCAATCTAAAAAGCCAACAAATGTTGCTCCTGGATTGTCAGGTAATTCCAGTCGGGCAAAGACTGCTATTAACCATGGACCTGCAACTTCAACCTATGCTAGTTCTGTCCAGGCTACACAGAGAACTGCTCATGGACATTTGTCTCCTGGCACGTCAAAGGAAATACGTGACAATGGTAGAATCATTCATTCTGCTTCTGCTCCAAATCTCATTGAAAGTGGTCCTTTGGAAGCTTCATTTTCTGATTTTCCTCCAGTATCTGCTACAAAAGCAAACAAGTTGCCTGCAAGTAGCCAGTCTTCGACAATGACAAATGTAGAGGATGTTCATTCTGCTAACAAGACCTTGGTTGAAAAGATTCGTAGTGCTCTTGATTTTGATCCAGATAGATACACCATTTTTAAAGACATTTCTGCACAATACCGCCAAGGAATAATTGATACAGGCACATATTTGGATTATGTGCAGCAGTTTGGCTTGTCTCATCTTGTACTTGAGTTAGCTAGACTGTGCCCTGATCCGCAGAAGCAGAAAGAACTTGTTGATTCGTACAATGCGAGTTTGCGAAGAACTGCTTTACAAGAAAATGATTGGGTTGGCAGTAGTATCCATCACAAAGATGGCAAGGTCTCCAAGAAAGGTAAAGGGAAAGGGAAAGGGAAGTCTATGGATATTGAAGAGAGGAACTCTAAGGAGAGTGTAGAAGATAGCTTTCTAAGCACCGTACGTCAATTACAGTTGAATCATAAACCTTCAGAACAGAATGCTGAGGTACTATCTAGGGGTGATTACCGTAGTGCCAAAGGTAAGTTGAAAATCTTGGCTGATGAACAACTGATTGGTACAAATTCTCATAGTCTACCCAACCCAAAGCATGCTGGGCAGAGTGAAGCATCACTTGGCAGTTTTCCTAACCAAAGTAAAGAAGAGGGGGCTAGGGGGAGCAAGCAACGCAAGAAAAGTTCTAAGTTCGTTAGAATGCGCCTTGGTGACGGTTCTGTAGAAAAATTGTTGGATCTTAAGAGTTCAAATGCCAACTCAGATCCTGGATCAACAGAGGCCTTGGATGGTAATAAGAACAATGCTGGAGGACTGCCTGTGCGAGGTGTCTGGCGGAATGGAGGTCATAAACTCTTTTCCTAG 2532 0.436 MDDCCAVCAETLEWVAYGPCLHREVCSTCVARLRFICDDRRCCICKTQCDRVFVTKALGDFTRMINNFSVLPSDVREGQVGSYWYHEDTNAFFDDMDHYKMIKAMCKLSCSVCDKMEEQAPDAPKRRARFRNIEQLKGHLFRFHRLLMCSLCLEGRKVFICEQKLYTRAQLNQHICTGDSEVDGSESERGGFMGHPMCEFCRTPFYGDNELYTHMSTEHFTCHICQRQHPGHYEYYKNYDDLETHFRQEHFLCEDEACLAKKFIVFQSEAEMKRHNAIEHGGRMSRSKRNAALQIPTSFRYRHGNQQDQRRGRGRTFRRDLSESELSMAIQASFDTASVESTSHDPATSSSGEVALGYGNFDNEPGIQSSESLATSSSELSLRYLQALGHSRSSPMGDSSFPPLPIASINGQANPKNEPEASSSNTMAAHLRRHSNINVSALNSANGWRVASRGSVQSSSNPMQSKKPTNVAPGLSGNSSRAKTAINHGPATSTYASSVQATQRTAHGHLSPGTSKEIRDNGRIIHSASAPNLIESGPLEASFSDFPPVSATKANKLPASSQSSTMTNVEDVHSANKTLVEKIRSALDFDPDRYTIFKDISAQYRQGIIDTGTYLDYVQQFGLSHLVLELARLCPDPQKQKELVDSYNASLRRTALQENDWVGSSIHHKDGKVSKKGKGKGKGKSMDIEERNSKESVEDSFLSTVRQLQLNHKPSEQNAEVLSRGDYRSAKGKLKILADEQLIGTNSHSLPNPKHAGQSEASLGSFPNQSKEEGARGSKQRKKSSKFVRMRLGDGSVEKLLDLKSSNANSDPGSTEALDGNKNNAGGLPVRGVWRNGGHKLFS 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0132 843 PANTHER ZINC FINGER PROTEIN 598 1 749 IPR044288 GO:0061630|GO:0072344
Lele08g0132 843 MobiDBLite consensus disorder prediction 745 843 - -
Lele08g0132 843 MobiDBLite consensus disorder prediction 336 356 - -
Lele08g0132 843 MobiDBLite consensus disorder prediction 391 427 - -
Lele08g0132 843 ProSiteProfiles Zinc finger RING-type profile. 5 46 IPR001841 -
Lele08g0132 843 MobiDBLite consensus disorder prediction 450 510 - -
Lele08g0132 843 MobiDBLite consensus disorder prediction 450 520 - -
Lele08g0132 843 SMART c2h2final6 220 250 IPR013087 -
Lele08g0132 843 SMART c2h2final6 251 280 IPR013087 -
Lele08g0132 843 SMART c2h2final6 196 219 IPR013087 -
Lele08g0132 843 SMART c2h2final6 108 144 IPR013087 -
Lele08g0132 843 MobiDBLite consensus disorder prediction 745 773 - -
Lele08g0132 843 MobiDBLite consensus disorder prediction 802 821 - -
Lele08g0132 843 MobiDBLite consensus disorder prediction 405 427 - -
Lele08g0132 843 MobiDBLite consensus disorder prediction 336 374 - -
Lele08g0132 843 MobiDBLite consensus disorder prediction 680 697 - -
Lele08g0132 843 MobiDBLite consensus disorder prediction 662 700 - -
Lele08g0132 843 CDD RING-HC_ZNF598 5 46 IPR041888 -
Lele08g0132 843 MobiDBLite consensus disorder prediction 301 322 - -
Lele08g0132 843 MobiDBLite consensus disorder prediction 304 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0132 Lele-ChrLele08 806257 811311 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g0132 1 843 C2H2 Transcription Factor Family AT3G62240 52.018 0.0 814
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele08g0132 08 806257 811311 Lele08g0132 08 806257 811311 ECH
Lele05g0310 05 1759414 1763741 Lele08g0132 08 806257 811311 hybridization
Lele06g0128 06 786744 791780 Lele08g0132 08 806257 811311 hybridization