Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0124 ATGGAAGATGAATCTTTTTTTCCCTGGCAAACAAGGACCCAATTTGAACCCATCACCGAGCATCGAGTTCCTGATTTATCCTTCACGAATTCTCATTCCTTCAACGAATTTTTCTCTTTACAGGAAGCCCAGCGAGACCCACCATCCCCATCTCAATTATTGACTCAGAATGCCCCCAAGAAGAAACTTACTCGCTGCAAGACTGCCCCTGCCATGGTTGTTTTGCAAGACCTTATAAAAAAATCGCCCGATGTTCCCAAACCGCAGTCTAGCTCCATCATCAGGCAAGGCGTTTGCTTGCTCATGATATATCTTTCAGTTGGGGTTGCCATATACTCCTTCAATCGGGACCATTTCTCGGGCGCAGAGACTCACCCGGTAGTTGACGCCCTTTACTTTTGTATAGTCACCATGTGCACAATCGGTTACGGAGACATCACACCGACAACCCCAGTAACCAAGGTCTTCGCCTGTATCTTTGTATTGGTAGGGTTTGGGTTCATTGACATATTGCTTAGCGGGCTTGTTAATTACGTCCTAGATTTGCAAGAGAACACGATTCTAACTGGGCTTAAAATGGGTGCTCAAGCTCAAAGATCTCAAGAAGGGTTCTCTGCAAGAAATTACATAGTTGACGTGGCAAAGGGGCGGATGAGAATCAGATTGAAGGTTGGTTTGGCACTTGGTGTGGTGGTGTTGTGTATTGGAATAGGGAGTCTGGTTTTGTACTTTGTGGAGGACTTGAATTGGATTGATTCAATTTACTTATCGGTTATGTCTGTAACAACAGTGGGGTATGGGGATAGAGCCTTCAAGACCCTTCCTGGGAGGCTCTTTGCTGCTATTTGGCTCCTCGTTTCCACACTGATGGTGGCCCGGGCATTCCTGTATTTGGCAGAGGCAAGAATTGATAAAAGGCACCGGACAATAGCCAAGTCGGTTTTGCATAGAGATATGACTGTTGAAGATTTGCTGGCTGCCACTATCAATAACACGGGCTTCATTAGGACTTGCTTGAACTTCTGCAACGCGAAGATCATTACGAATTATGACCAATTTCATCCGGTGATATTTACCGTAGAACTGGAGTGGGTCAGTAAAGCAAGAACACCTACCTGCGTAGGCGGAAGAAAATTGAAGTGGCTTACGGAATCCATGGAAACGGCGATAGAGATCCAGTTGAGTACATTATTGTGTGTGTTGGTGAGTGTGCTTGTGACGAAGATCTCCGTTGTAGTCACAGAGAACTCTCTGTCTGCAGTGGGTGACCCTGGAATGCAGAGAGATGGACTGAGGGTGGCCTTTGAAGCTTGGAACTTTTGCAATGAAGTTGGGGAAGAAGCCCCTAACATGGGTAGCCCAAGAGCTGCTGACTGTTTCGATCTTTCAAGTTCAAGTTCTCTGAAGCACAAGGTTACAGAAGTTGATAACAGACTTGGGGTAGGGAAACATGGTTTGGGAAGAGATATAAAAAACCCAGATCTCTATGCAGTGAAAAAGGAACTATATCTGGGTTCTATCTGTGAAGTCGCAGATACCCCAAGACCATGGCAATTTTGGATGATCATGTTGAAAAATGGAAACTACGATACAGAGTCTGGTTTATGTCCTGAGAATGGGAAGAAGGTAGCCTCTTCAAGGCGTGGACGATTTCCCTGCTTTGGAAAAGGGTGTATGAACCAGCCCATCATGTGTCATCAAGAGACACAGCTACAACATGGGATCATGCGAGGAGGTTTCAATGGTACTTATGATTTGAATTCTGGTTGTGGAGGCGGCAACAGTGGCCTCTCTTACTACGAGGTTGTCTGGGAAAAGAAAGTGAATGTCGGGAGTTGGGTTTTCAAACATCAACTACAGACCTCAGAGAAATACCCATGGTTGATGCTGTACCTGAGAGCTGACGCAACCAAAGGATTCTCTGGAGGCTACCATTATGACACCAGGGGAATGCTCAAAACTCTTCCAGAGTCACCAAATTTTAAGGTGAGGGTGAGTTTAGACATCAAAAGAGGGGGAGGAGCCAAGAGCCAATTCTACCTGGTAGACATAGGAAGCTGCTGGAAGAACAATGGAGCTGCTTGTGATGGAGATGTGGTCACCGATGTAACGAGATACAGCGAGATGATCATAAACCCAGAAACTCCATCTACATGTAGCCCCAAGAGGTTGAAGAATTGCCCACCATTTCACATAACAAGAGACAAGAGAAAGATCCATAGAGATGACACTGCTAATTTCCCTTACTCGGCTTATCACTATTATTGTGCTCCCGGTAATGCCCAACACTTGGAGCAACCTGTGAGGATTTGTGATCCTTACAGCAACCCTCAGGCACAAGAAATAGTTCAGTTGCTGCCTCACCCAGTTTGGGCTGATTATGGGTATCCCGCCAAAAAAGGGGATGGTTGGGTTGGGGATGCAAGAACTTGGGAGCTTGATGTTGGTGGATTGTCCAGTAACCTCTACTTCTACCAGGACCCTGGCTCTCCTCCTGCTAAGAGGGTATGGACTTCTATCGATTTGGGTACTGAGATTTATGTTAGTGAAAAAGATGAAGTAGCAGAGTGGACTCTCCAAGACTTTGACGTCCTCCTCACGCAGCCAAATTCATGA 2616 0.4595 MEDESFFPWQTRTQFEPITEHRVPDLSFTNSHSFNEFFSLQEAQRDPPSPSQLLTQNAPKKKLTRCKTAPAMVVLQDLIKKSPDVPKPQSSSIIRQGVCLLMIYLSVGVAIYSFNRDHFSGAETHPVVDALYFCIVTMCTIGYGDITPTTPVTKVFACIFVLVGFGFIDILLSGLVNYVLDLQENTILTGLKMGAQAQRSQEGFSARNYIVDVAKGRMRIRLKVGLALGVVVLCIGIGSLVLYFVEDLNWIDSIYLSVMSVTTVGYGDRAFKTLPGRLFAAIWLLVSTLMVARAFLYLAEARIDKRHRTIAKSVLHRDMTVEDLLAATINNTGFIRTCLNFCNAKIITNYDQFHPVIFTVELEWVSKARTPTCVGGRKLKWLTESMETAIEIQLSTLLCVLVSVLVTKISVVVTENSLSAVGDPGMQRDGLRVAFEAWNFCNEVGEEAPNMGSPRAADCFDLSSSSSLKHKVTEVDNRLGVGKHGLGRDIKNPDLYAVKKELYLGSICEVADTPRPWQFWMIMLKNGNYDTESGLCPENGKKVASSRRGRFPCFGKGCMNQPIMCHQETQLQHGIMRGGFNGTYDLNSGCGGGNSGLSYYEVVWEKKVNVGSWVFKHQLQTSEKYPWLMLYLRADATKGFSGGYHYDTRGMLKTLPESPNFKVRVSLDIKRGGGAKSQFYLVDIGSCWKNNGAACDGDVVTDVTRYSEMIINPETPSTCSPKRLKNCPPFHITRDKRKIHRDDTANFPYSAYHYYCAPGNAQHLEQPVRICDPYSNPQAQEIVQLLPHPVWADYGYPAKKGDGWVGDARTWELDVGGLSSNLYFYQDPGSPPAKRVWTSIDLGTEIYVSEKDEVAEWTLQDFDVLLTQPNS 871
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0124 871 PRINTS Two pore domain K+ channel signature 262 271 IPR003280 GO:0005267|GO:0016020|GO:0071805
Lele08g0124 871 PRINTS Two pore domain K+ channel signature 136 164 IPR003280 GO:0005267|GO:0016020|GO:0071805
Lele08g0124 871 FunFam Two-pore potassium channel 3 207 321 - -
Lele08g0124 871 FunFam Two-pore potassium channel 5 82 192 - -
Lele08g0124 871 Gene3D - 71 207 - -
Lele08g0124 871 Gene3D - 208 324 - -
Lele08g0124 871 PANTHER - 397 868 - -
Lele08g0124 871 SUPERFAMILY Voltage-gated potassium channels 215 325 - -
Lele08g0124 871 Pfam Ion channel 101 179 IPR013099 -
Lele08g0124 871 Pfam Ion channel 232 299 IPR013099 -
Lele08g0124 871 SUPERFAMILY Voltage-gated potassium channels 94 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0124 Lele-ChrLele08 752829 758230 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g0124 39 335 Ion Channels AT4G01840 65.461 6.58e-128 389