Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0121 ATGCTTGCCCTACAAGCAAACACAAGTGGCAAATCGTTTATAAAATTGGTGGGAACAAATCTACCGAATCACCAGCACCAGGTACGAGTCATAGTTGAACAATCAAGAGAACTGAGATCGCAGAAAACTGGTTGCTTCAGCCTTTCAGGTTACCATTTTCAAATATCTCCTCGCCTCTCTGTCTCTGCGCTTCCTTATTCCTTTCTGTTTTGGATTCCAGCTCACAGGCTTATTGACGTTACAAGGCATAGATCTGATATGGGGACCGAGAACGGCCAAGACGAAGCAAGCACGTCAAAGAATGAAGCAGGAACAAGCTCAAAAGAAGAAAATAGCAATCAAACAGACAAGGCGGAGACAGTTCCGTTTCATAAGTTGTTCACATTCGCCAACTCTACAGATATATTGTTGATGGTTGTTGGCAGCATCGGGGCCATCGGAAATGGTGCGGGTTTGCCTCTCATGACGTTGCTGTTCGGCGAGATGATTGACTCCTTCGGGAATAACCAGTACAGCGCTGACGTGGTCGATGAAATTTCCAAGGTTTCTCTGAAGTTTGTGTACTTGGCGGTAGGAGCTGGAGTGGCAGCTTTTCTCCAGGTGGCTTGCTGGATGGTCACAGGGGAGAGACAGGCCGCGAGAATAAGGAGTTTGTATTTGAAAACAATACTGAGACAAGATGTGGCTTTCTTCGATAAGGAAACAAACACAGGAGAGGTGGTCGGTAGAATGTCAGGTGACACTGTTCTTATACAAGACGCCATGGGTGAAAAGGTTGGAAAATTTCTGCAGCTAATATCAACATTCGTTTCGGGTTACATAGTGGCATTTGTGAAAGGTTGGCTTCTCAGTCTTGTCATGTTATCCACTCTTCCACTTCTTGTGGTGTCTGGTGCGGCTATGGCCTTGATTATAGGCAGGATGGCATCGCAAGGCCAAACTGCTTATGGAAAAGCTGCAAACATCGTTGAACAGACAATTGGCGCAATTAGAACGGTTGCATCCTTCACGGGAGAGAAGCACGCATTATCTGGTTACAGCAGGTTTCTTGTAGATGCATACAGAGCAGGAGTTCAGGAAGGTTTGGTAGCAGGAGCGGGTATTGGGACGGTTATGTTCGTTATTTTCTGTGGCTATGCTTTGGCCACATGGTATGGTGCAAAGTTGATACTGGATAAAGGATATAACGGGGGTGATGTGATTACTGTGATCTTTTCCGTCTTAACTTCTTCCATGAATCTTGGTCAAGCAGCCCCTTGTTTGAGTGCTTTTGCGGCCGGCCAAGCTGCAGCTTATAAAATGTTCAAGACTATTGAGAGAAAACCAGAGATAGATTCTTATGATGAAAAAGGGAAAATATTAGAAGATGTTCAAGGGGAAATAGAGTTGAGGGAAGTTTATTTCAGTTACCCAGCTAGACCTGGGGAGCTGATTTTTGATGGCTTCTCTCTTAAAATACCAAGTGGCACTACTGCAGCTTTGGTTGGACAAAGTGGAAGTGGAAAGTCCACTGTCATCAGTTTAATAGAAAGATTTTATGATCCACGGGTAGGTGAAGTTCTTATAGATGGCATTAACTTGAAAGAATTCCAACTCAAATGGATTAGAGGAAAAATTGGGCTTGTCAGCCAAGAGCCTGTCCTTTTTGCATCTAGCATTAAGGATAACATTGCTTATGGAAAGGAGGGAGCAACAACTGAAGAGATACAAGCTGCAGCTGAACTTGCAAATGCAGCTAAATTCATTGATAAATTACCACAGGGATTGGACACAATGGTTGGTGATCATGGAACTCAGTTGTCTGGGGGACAGAAGCAGCGCATTGCCATTGCAAGAGCAATCCTCAAAAATCCAAAAATCCTACTTCTAGATGAAGCTACGAGTGCACTTGATGCAGAGTCTGAAAGGATTGTGCAAGAGGCTCTAGACAGGATCATGGGAAACAGAACAACCGTTGTTGTGGCACACCGCTTAAGCACAGTGAAAAATTCAGATATGATTGCTGTGATTCACAGAGGGAAAATGGTCGAGAAAGATGCAAAGATGATGTACGAGGAAGCAAGTCAAGTTGCTACCGATGCAGTTGGAAGTATAAGAACAGTAGCTTCTTTTTGTGCTGAAGAAAAGGTGATGGAACTATACAGAAAGAAATGTGAAGGGCCTATGAAATCAGGGGTACATCAGGGCTTGATCAGTGGAACAGGATTTGGAGTATCGTTTTTCCTACTCTTCTCCGTCTACGCAACCAGCTTTTACGCGGGAGCTAGACTTGTGGAGGACGGCAAAGCGACATTCCCAGATGTTTTTCGGGTTTTCTTTGCTCTAACCATGGCAGCTTTAGCAGTTTCCCAATCAAGCTCTTTTGCGCCTGATTCTAGCAAAGCCAAGTCAGCCGCCGCTTCTATATTTGGAATAATTGACAGGAAATCGGAGATAGATCCCAGCGACGAGTCAGGAGCCACATTGGATAGCGTGAAGGGAGAAATTGAGCTTCGTCATGTTAGCTTCAAGTATCCATCAAGGCCAGATATACAGATTTTCCGAGACCTTAGCTTGGCCATACATTCTGGAAAGACGGTGGCCCTTGTAGGTGAAAGTGGAAGTGGAAAATCTACGGTGATTTCATTATTGCAAAGATTTTACGATCCTGATTCGGGTTCAATTACACTTGATGGAATAGAGATTCAAAAGTTGCAACTCAAATGGTTAAGGCAACAAATGGGTCTTGTGAGCCAGGAGCCAATATTGTTCAATGACACTATTCGTGCCAATGTTGCCTATGGAAAGGGAGGCGATGCAACAGAAGGAGAAATCATAGCTGCAACCGAACTGGCCAATGCTCATAAGTTCATTAGCGGCTTACAACAAGGGTATGATACAGTAGTGGGAGAAAGGGGAATTCAATTATCAGGTGGGCAAAAGCAAAGAGTAGCAATTGCACGTGCTATAATTAAGAGTCCAAAGATTTTGTTATTAGACGAAGCAACGAGTGCTTTGGACGCAGAGTCAGAGAGGGTGGTTCAAGATGCATTGGATAGAGTGATGGTGAATAGAACTACCGTGGTTGTGGCGCATCGTTTATCTACAATAAAAAATGCAGATGTTATCGCAGTGGTTAAGAACGGAGTCATAGTTGAGAAAGGAAGGCACGAGACCTTGATTAACATCAAGGATGGATTCTATGCTTCTTTAGTCCAACTTCACGCGAGCGCTTCTACATCATGA 3225 0.4409 MLALQANTSGKSFIKLVGTNLPNHQHQVRVIVEQSRELRSQKTGCFSLSGYHFQISPRLSVSALPYSFLFWIPAHRLIDVTRHRSDMGTENGQDEASTSKNEAGTSSKEENSNQTDKAETVPFHKLFTFANSTDILLMVVGSIGAIGNGAGLPLMTLLFGEMIDSFGNNQYSADVVDEISKVSLKFVYLAVGAGVAAFLQVACWMVTGERQAARIRSLYLKTILRQDVAFFDKETNTGEVVGRMSGDTVLIQDAMGEKVGKFLQLISTFVSGYIVAFVKGWLLSLVMLSTLPLLVVSGAAMALIIGRMASQGQTAYGKAANIVEQTIGAIRTVASFTGEKHALSGYSRFLVDAYRAGVQEGLVAGAGIGTVMFVIFCGYALATWYGAKLILDKGYNGGDVITVIFSVLTSSMNLGQAAPCLSAFAAGQAAAYKMFKTIERKPEIDSYDEKGKILEDVQGEIELREVYFSYPARPGELIFDGFSLKIPSGTTAALVGQSGSGKSTVISLIERFYDPRVGEVLIDGINLKEFQLKWIRGKIGLVSQEPVLFASSIKDNIAYGKEGATTEEIQAAAELANAAKFIDKLPQGLDTMVGDHGTQLSGGQKQRIAIARAILKNPKILLLDEATSALDAESERIVQEALDRIMGNRTTVVVAHRLSTVKNSDMIAVIHRGKMVEKDAKMMYEEASQVATDAVGSIRTVASFCAEEKVMELYRKKCEGPMKSGVHQGLISGTGFGVSFFLLFSVYATSFYAGARLVEDGKATFPDVFRVFFALTMAALAVSQSSSFAPDSSKAKSAAASIFGIIDRKSEIDPSDESGATLDSVKGEIELRHVSFKYPSRPDIQIFRDLSLAIHSGKTVALVGESGSGKSTVISLLQRFYDPDSGSITLDGIEIQKLQLKWLRQQMGLVSQEPILFNDTIRANVAYGKGGDATEGEIIAATELANAHKFISGLQQGYDTVVGERGIQLSGGQKQRVAIARAIIKSPKILLLDEATSALDAESERVVQDALDRVMVNRTTVVVAHRLSTIKNADVIAVVKNGVIVEKGRHETLINIKDGFYASLVQLHASASTS 1074
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0121 1074 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 684 794 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele08g0121 1074 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 461 697 IPR003439 GO:0005524
Lele08g0121 1074 PANTHER ABC TRANSPORTER B FAMILY 100 679 - -
Lele08g0121 1074 ProSitePatterns ABC transporters family signature. 600 614 IPR017871 GO:0005524|GO:0016887
Lele08g0121 1074 SUPERFAMILY ABC transporter transmembrane region 124 445 IPR036640 GO:0005524|GO:0016020
Lele08g0121 1074 Gene3D - 819 1073 IPR027417 -
Lele08g0121 1074 Gene3D ABC transporter type 1, transmembrane domain 139 478 IPR036640 GO:0005524|GO:0016020
Lele08g0121 1074 FunFam ABC transporter B family member 1 451 691 - -
Lele08g0121 1074 Gene3D - 483 696 IPR027417 -
Lele08g0121 1074 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 139 426 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele08g0121 1074 CDD ABC_6TM_Pgp_ABCB1_D1_like 138 422 - -
Lele08g0121 1074 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 451 678 IPR027417 -
Lele08g0121 1074 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 820 1067 IPR027417 -
Lele08g0121 1074 Pfam ABC transporter transmembrane region 141 412 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele08g0121 1074 Pfam ABC transporter transmembrane region 675 779 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele08g0121 1074 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 829 1066 IPR003439 GO:0005524
Lele08g0121 1074 Pfam ABC transporter 848 997 IPR003439 GO:0005524
Lele08g0121 1074 FunFam ABC transporter B family member 9 125 458 - -
Lele08g0121 1074 Pfam ABC transporter 480 628 IPR003439 GO:0005524
Lele08g0121 1074 CDD ABC_MTABC3_MDL1_MDL2 829 1067 - -
Lele08g0121 1074 SMART AAA_5 856 1049 IPR003593 -
Lele08g0121 1074 SMART AAA_5 488 660 IPR003593 -
Lele08g0121 1074 MobiDBLite consensus disorder prediction 86 117 - -
Lele08g0121 1074 MobiDBLite consensus disorder prediction 91 117 - -
Lele08g0121 1074 SUPERFAMILY ABC transporter transmembrane region 676 814 IPR036640 GO:0005524|GO:0016020
Lele08g0121 1074 ProSitePatterns ABC transporters family signature. 969 983 IPR017871 GO:0005524|GO:0016887
Lele08g0121 1074 FunFam ABC transporter B family member 9 796 818 - -
Lele08g0121 1074 FunFam ABC transporter B family member 1 819 1069 - -
Lele08g0121 1074 CDD ABC_MTABC3_MDL1_MDL2 461 678 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0121 Lele-ChrLele08 734530 740327 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g0121 131 678 Calmodulin-binding Proteins AT2G36910 37.906 8.88e-108 364