Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0114 ATGCCTCGTAAAACTAGTTGCAGAGCTCCAAAGAAGTCTGGAAATGACTCAAATTTAATCTTTCCTTCTCCAGAAAAAGAATGCTATGAAGGAGAGCGTCTCACCAATCTGTTGCAATCGATTCATAGGGAGATTGAATCAGCAAGAACAATTGATGGAAATTCTTTACCAGAGAAAATATGGTTAAAGCAACAATTTTCTGTGGGCGTGAATGATGTAACCCGTGTTCTTGAGCGCATGGCACCGTGCACTGAATTGCAAAGCTTTTCTCAGCCCTCTCCTTTAATTAGCTGCAATAATAGAGCATCTTCAATCAAACTTCAGGTTGTGCTAGTAGCTTCTGACTGTAACCCGCGATGGCTGATAAAGCATCTGCCAAGCTTGGCTTCATCAAGGAAAGTGCCACTGATGTTCATTAGAGATAACAAAAAAGGTTCCTCGAGATTAGGCGAACTTGTAAATACGAAAACTGCTATTGCCGTTGGTGTTAAGGCAAGAGAAAACACGATCAACAAACTCTTGGAGAAAATCCTCCAACAGGATGATGGAGTTGAATCCTATGGTCCAAGCTTAAGCTGA 579 0.4145 MPRKTSCRAPKKSGNDSNLIFPSPEKECYEGERLTNLLQSIHREIESARTIDGNSLPEKIWLKQQFSVGVNDVTRVLERMAPCTELQSFSQPSPLISCNNRASSIKLQVVLVASDCNPRWLIKHLPSLASSRKVPLMFIRDNKKGSSRLGELVNTKTAIAVGVKARENTINKLLEKILQQDDGVESYGPSLS 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0114 192 Pfam Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 106 165 IPR004038 -
Lele08g0114 192 PANTHER OS07G0636400 PROTEIN 15 182 - -
Lele08g0114 192 SUPERFAMILY L30e-like 32 179 IPR029064 -
Lele08g0114 192 Gene3D - 42 180 IPR029064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0114 Lele-ChrLele08 687616 689053 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g0114 106 187 Cytoplasmic Ribosomal Protein Gene Family AT3G62870 35.632 7.93e-06 43.1