Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0110 ATGGGAGAGGTAGCTAACGTGAAGAAATGGCTCATTTTTTATAGCTTAGGGGTGGAGGAGACAGGTGAAGACGTTGTTTCATGCTGGGCCGATAAGGATTTGGGGCATACGACCAGGGCAAAGTACTTGTGCTCTATAAAGGCTCTTCTGATTCCTTCTCCTTCCAACACAGAAAACTACAGTTCAGTAAATACGGCATCCTCTTTCTTCTTCATCTTCTCAACCTCGTTACTCTGCCATCCCTACTCTGCATCCTTGGGAGCCGAGGCTCGTCGTGATCCGTCTTCCATTTCATCTCTCATAAGCAAACAGCTCTTTAAAACCATCTTCCTCCACAAAGATGGCTCCGCATGCCCTGCAAAGGACTTCTACACCTACAAGTCCTTCATTCAGGCAGCCAAAAGCTTCCCTGAATTTGGCACCGCAGGAAATATAAGCACACGAAAGCGTGAGATCGCTGCATTTCTCGCTCAGATCTCCCACGAGACCACCGGTGGGTGGGCCACTGACCCTGATGGACCCTTTGCCTGGGGCTTGTGCTTCGAGGAAGAACTCAAATCTCAGAGTAATTACCGTGACTCCAACAACACTCAACGGCCCTGTAACCCTGGCAAGGGTTACTTTGGCAGAGGACCCATCCAACTCTCTTGGAACTTTAACTATGGGCCAGCAGGGAAGGCTTTGGGATATGATGGGTTGATGAATCCTGAGATCGGATCCAACAATCCTGTGATTGCGTTTAAGACGGCTCTGTGGTTTTGGATGACAGAACGAAAGCCGATACCTTCTCCCCACAGTGTGATGGTGGGGGAATACGTGCCCACAAAAACTGATACAGAGGCTAATCGTACGGCTGGGTATGGGTTGGTGACCAACATAATCAACGGTGAATTGGGTGTGGGATCCCTAACGACGCCAGAGTGA 924 0.4957 MGEVANVKKWLIFYSLGVEETGEDVVSCWADKDLGHTTRAKYLCSIKALLIPSPSNTENYSSVNTASSFFFIFSTSLLCHPYSASLGAEARRDPSSISSLISKQLFKTIFLHKDGSACPAKDFYTYKSFIQAAKSFPEFGTAGNISTRKREIAAFLAQISHETTGGWATDPDGPFAWGLCFEEELKSQSNYRDSNNTQRPCNPGKGYFGRGPIQLSWNFNYGPAGKALGYDGLMNPEIGSNNPVIAFKTALWFWMTERKPIPSPHSVMVGEYVPTKTDTEANRTAGYGLVTNIINGELGVGSLTTPE 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0110 307 ProSitePatterns Chitinases family 19 signature 2. 245 255 IPR000726 GO:0004568|GO:0006032|GO:0016998
Lele08g0110 307 FunFam Endochitinase (Chitinase) 183 241 - -
Lele08g0110 307 CDD chitinase_GH19 101 298 - -
Lele08g0110 307 SUPERFAMILY Lysozyme-like 96 298 IPR023346 -
Lele08g0110 307 Gene3D - 104 302 - -
Lele08g0110 307 ProSitePatterns Chitinases family 19 signature 1. 118 140 IPR000726 GO:0004568|GO:0006032|GO:0016998
Lele08g0110 307 Pfam Chitinase class I 100 301 IPR000726 GO:0004568|GO:0006032|GO:0016998
Lele08g0110 307 Gene3D Endochitinase, domain 2 183 241 - -
Lele08g0110 307 PANTHER CHITINASE-RELATED 64 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0110 Lele-ChrLele08 660820 664631 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g0110 71 301 Glycoside Hydrolase AT4G01700 63.203 1.10e-105 308
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele08g0110 08 660820 664631 Lele14g2101 14 26639379 26640302 CCT
Lele08g0110 08 660820 664631 Lele16g0256 16 1420123 1421014 CCT
Lele05g0293 05 1650556 1651478 Lele08g0110 08 660820 664631 hybridization
Lele06g0108 06 673505 674928 Lele08g0110 08 660820 664631 hybridization