Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0106 ATGGGGAGGCACTCTTGCTGCTACAAGCAAAAGCTTCGCAAAGGCCTCTGGTCCCCGGAGGAGGACGAGAAACTCCTCCGCCATATCACTAAGTATGGCCATGGCTGCTGGAGCTCTGTTCCTAAGCAAGCAGCTCAGCTGCCAGGAAGAACGGACAATGAAATAAAGAATCTGTGGAACTCATGCCTCAAGAAGAAGCTGAGGCAAAGAGGGATAGACCCTGTGACCCATAAACCACTGTCCGAGGTCGAGAATGGGGACCAAGAGAAAGTTACAGCGGTTAGTTCCAATGAATTGAACCTCCTGAAATCAGAAAGCTCAAAGTCAGATGGAGCTTCCTATGAGCACAAACCATGTTCGAGTATTGCCCGTAAAGCCTATGCACACGACATGGAGGGTTCTTCTTCCACCTCCAAGCTGAACACCAGAAACAACACAAATTGCAATTTCATCCCCGATTGTTGCAGTAAAGAATTGTTCCTGGACAACAACAGGTTCATTGCCAGCAGCAGTCACCAGGAAAGCTACACCACTTCAGATTTCATGACAAATTTCCCTCTTCACATGAACTATAATAACAATCCATTCGCAACTCAAACCGGAGGAATTAGACCATTTGATATCAATACTGAATTCACCTCCAGTGCCATGTCCACTGTATTCCCACTTTCTTCAACCTCCTCATTTCTCCCGACTTCTGTCTGCTACAAGCCTTCTCTCCCATCAGTTCCATCTGATGATATCTCGACAGGTTCCTTCTCCATGAACGAATCCCAGTACTGGGAAGCCACTGCTTCGAACAATCACAGCAATAGAAACAGCCACTCGAACTTGCATAACAGTATTGTTTCTTGGGGATTGACAGATTGTGGCGGAACTGGTAAAGAAACTCATCATCAGATTAATATGATGGAGAGTCAGACAGAAGAACCAAGTTGGGCTGAGTACCTTCATAGTAATCCAATCTTAATGCTGGCTCCAGAATCCTTATGCAACGATATAAAGCCAGCCGCACATTCGGTACCCGATGCTTTAGGAGCTATTTTGCCTCATCATCACAAGCAGCAAGATCATCATCAAGCTTTACAAACTTCTGCAATATTCTCAAAGGACATCCAGAAGCTCACCGCAGCTTTCGGACATATATAG 1149 0.4569 MGRHSCCYKQKLRKGLWSPEEDEKLLRHITKYGHGCWSSVPKQAAQLPGRTDNEIKNLWNSCLKKKLRQRGIDPVTHKPLSEVENGDQEKVTAVSSNELNLLKSESSKSDGASYEHKPCSSIARKAYAHDMEGSSSTSKLNTRNNTNCNFIPDCCSKELFLDNNRFIASSSHQESYTTSDFMTNFPLHMNYNNNPFATQTGGIRPFDINTEFTSSAMSTVFPLSSTSSFLPTSVCYKPSLPSVPSDDISTGSFSMNESQYWEATASNNHSNRNSHSNLHNSIVSWGLTDCGGTGKETHHQINMMESQTEEPSWAEYLHSNPILMLAPESLCNDIKPAAHSVPDALGAILPHHHKQQDHHQALQTSAIFSKDIQKLTAAFGHI 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0106 382 PANTHER MYB DOMAIN PROTEIN 55 1 44 - -
Lele08g0106 382 SUPERFAMILY Homeodomain-like 7 73 IPR009057 -
Lele08g0106 382 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 67 IPR017930 -
Lele08g0106 382 SMART sant 13 65 IPR001005 -
Lele08g0106 382 Gene3D - 11 69 - -
Lele08g0106 382 ProSiteProfiles Myb-like domain profile. 9 63 IPR001005 -
Lele08g0106 382 CDD SANT 17 60 IPR001005 -
Lele08g0106 382 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0106 Lele-ChrLele08 630164 631643 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g0106 1 102 MYB Transcription Factor Family AT4G01680 54.967 5.76e-47 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele08g0106 Myb_DNA-binding 3.2e-11 CL0123