Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0098 ATGGAAAAGCTAGTACTGAGTGTTGTGATATTGTTGGTGGGATTATCCACCACACAGCTAAGAACAGCAGCCGGGGCCGGCTGGCTGCGAGCACATGCAACTTTCTATGGAGGAAGCGACGCCTCAGGCACAATGGGAGGTGCATGTGGTTATGGGAATCTATACAAGGATGGTTATGGGACGAGAACGGCGGCATTAAGCACAGCTCTGTTCAACGACGGGAAGGCGTGCGGCGGATGCTATCAGATAGTGTGTGACGGAACACAAGCGCCACAGTGGTGCCTGAGAGGGAGTTACATCACAATCACCGCCACAAATTTCTGTCCTCCTAACTATGCTCTTCCCAGTGACAATGGAGGTTGGTGCAATCCTCCCAGACCTCATTTTGACATGTCTCAGCCTGCTTTTGAGACTATCGCCAAGTACCGCGCCGGAATTGTTCCCGTTTTCTTCCGACAGGTTGGGTGCAAGAGAAGAGGAGCCATCAGGTTTACCATAAATGGGAGAGACTATTTTGAGCTTGTTCTTATTAGCAACGTGGGCGGTGCTGGCGAAATCTCCCGAGTTTGGGTCAAAGGATCCAGAATGAGTGACTGGGAGACCATGTCCAGGAACTGGGGAGCTAACTGGCAGAGCCTAACCAATCTCAACGGTCAAAGCTTGTCTTTCCGAGTCCAACTCAGCAACGGCAGATATCGCACCGCTTATAACGTCGCCCCCTCCAACTGGAGATTTGGCCAGTCCTTCGTCAGCAACGTTCAGTTCTGA 768 0.5169 MEKLVLSVVILLVGLSTTQLRTAAGAGWLRAHATFYGGSDASGTMGGACGYGNLYKDGYGTRTAALSTALFNDGKACGGCYQIVCDGTQAPQWCLRGSYITITATNFCPPNYALPSDNGGWCNPPRPHFDMSQPAFETIAKYRAGIVPVFFRQVGCKRRGAIRFTINGRDYFELVLISNVGGAGEISRVWVKGSRMSDWETMSRNWGANWQSLTNLNGQSLSFRVQLSNGRYRTAYNVAPSNWRFGQSFVSNVQF 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0098 255 Gene3D - 14 157 IPR036908 -
Lele08g0098 255 SMART dpbb_1 63 151 IPR007112 -
Lele08g0098 255 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 46 161 IPR007112 -
Lele08g0098 255 FunFam Expansin 18 157 - -
Lele08g0098 255 SUPERFAMILY PHL pollen allergen 158 250 IPR036749 -
Lele08g0098 255 FunFam Expansin 161 255 - -
Lele08g0098 255 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 171 251 IPR007117 -
Lele08g0098 255 Gene3D - 160 255 IPR036749 -
Lele08g0098 255 Pfam Expansin C-terminal domain 162 240 IPR007117 -
Lele08g0098 255 Pfam Lytic transglycolase 63 150 IPR009009 -
Lele08g0098 255 PRINTS Expansin/Lol pI family signature 199 213 IPR007118 GO:0005576
Lele08g0098 255 PRINTS Expansin/Lol pI family signature 45 63 IPR007118 GO:0005576
Lele08g0098 255 PRINTS Expansin/Lol pI family signature 27 42 IPR007118 GO:0005576
Lele08g0098 255 PRINTS Expansin/Lol pI family signature 67 85 IPR007118 GO:0005576
Lele08g0098 255 PRINTS Expansin/Lol pI family signature 237 251 IPR007118 GO:0005576
Lele08g0098 255 PRINTS Expansin/Lol pI family signature 144 160 IPR007118 GO:0005576
Lele08g0098 255 PRINTS Expansin signature 160 172 IPR002963 GO:0009664
Lele08g0098 255 PRINTS Expansin signature 237 253 IPR002963 GO:0009664
Lele08g0098 255 PRINTS Expansin signature 172 193 IPR002963 GO:0009664
Lele08g0098 255 PRINTS Expansin signature 87 98 IPR002963 GO:0009664
Lele08g0098 255 PRINTS Expansin signature 100 110 IPR002963 GO:0009664
Lele08g0098 255 PRINTS Expansin signature 119 136 IPR002963 GO:0009664
Lele08g0098 255 PRINTS Expansin signature 58 72 IPR002963 GO:0009664
Lele08g0098 255 PRINTS Expansin signature 208 229 IPR002963 GO:0009664
Lele08g0098 255 PRINTS Expansin signature 136 149 IPR002963 GO:0009664
Lele08g0098 255 SUPERFAMILY Barwin-like endoglucanases 27 179 IPR036908 -
Lele08g0098 255 PANTHER EXPANSIN-A15 9 251 IPR002963 GO:0009664
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0098 Lele-ChrLele08 587897 589374 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g0098 1 255 Expansin Gene Family AT4G01630 72.157 3.72e-143 399