Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0086 ATGTTGGGTTTATATACATATGAATGGCGTGGAGAGAGCTTGGAAGAAAGGTGTGGGTTTGAGCGGGAGAGAATATATATGAACTTTGCCAGGGCTTTGACTGCAGTGCCATCTAGGCATTTTGCACGGTCATGTTCTTCATCTACCTTTGCAGCAAAATCTGTTTATGCATCAGCAGGATGCTTGACTGAATTTATCAGTCACTCATCTGCCGGAGCGGCTGGTTTTTGCAATGGAACAAAAGAACATGGAATACGATACCGTAGGCGGTTCCACGCTAATCCAGAACTATGGGCGAGAAGAAATGAGGAGTTATTTGGTTTGAAGACTCCAAAGAAGGAGAAGCGTGTGAGAAGGGACTGTAAAAATCAACCCCCTGTTGAAGCTCCATATGTTCCTCGTAATGTGGTCAAATCTACCAAATCCATTCTTGATAAAACAATTGAAATATTTGAAGGCATGACTATTGCTGAGCTGGCAAAGCGTACTGGAAAATCAGCATCCTCTCTGCAAGGTACTCTAGTAAATGTTGGGGAAAAGGTTGAATCAGAGTTTGAGCCTCTCAGTGTTGATATTGCAGAACTTGTTGCAATGGAAGTGGGTGTCAATGTCAAGAGGCTACATTCTACTGAAGGTGCAGAGATTGCTCCCCGGCCTGCAGTTGTAACAGTGATGGGTCATGTTGACCATGGTAAAACCTCCCTTCTCGATTCTTTGCGCCAAACATCAGTGGCAGCCAAGGAGGCTGGGGGTATAACTCAGTATCTAGGTGCCTTTGTGGTGGCCATGCCATCAGGAGCATCAATCACATTTCTGGACACACCTGGTCATGCTGCATTTAGTGCAATGCGGGCAAGAGGTGCAGCGGTTACAGATGTGGTGGTACTTGTTGTTGCTGCAGATGATGGGGTGATGCCTCAAACACTTGAAGCTATATCCCATGCAAAAGCAGCTAATGTACCGATAGTAGTTGCAATAAATAAATGTGATAAACCAGGAGCAAATCCTGAGAGAGTAAAACTTCAGCTTGCATCAGAGGGCTTGTTGCTGGAAGAGATGGGTGGGGATATTCAGGTGGTTGAAGTTTCTGCGACTATGAAAACTGGACTGGATAACTTGGAGGAAGCTTTGCTCCTTCAGGCTGAAATGATGGATCTAAAAGCTCGAATTGATGGCCCTGCTCAAGCTTATGTGGTAGAAGCAAGGCTTGATAAAGGACGAGGCCCATTAGTTGCTGCTATTGTGAAGGCAGGGACTCTTGTTTGTGGTCAGTATGTGGTTATAGGCTCAGAATGGGGCAAAATAAGGGGTATTAGAGAAGTGACGGGTAAGTTGACTGACAGAGCAACACCCGCATGCCTGTTGAGATTGAAGGGCTTCGGGGGACTCCCATGGCTGGTGATGATGTTATTGTTGTTCAATCAGAGGAGCGTGCACGATTGCTTAGTGCTGAGGGTTGAATTGTCAATAGTAGTGAAAGCTGATGTCCAGGGCACTGTTCAAGCTGTCACAGATGCGTTGAGAACTTTAAATAGTTCTCAGGTTTTCGTGAACTTTGTCCATGTTGGTGTAGGGCCTATTTCTGAATCTGATGTGGACCTAGCACAGGCTTGCGGTGCATGCATAGTTGGATTCAATGTGAAGAGTCCACCTAGTCCTATTAGTCAGGCAGCAGGCCGTGCCAATATAAAGATAGGCAATTTGATAATAGAGAAGGCTCCAGGGACGTCTGAAACCCAGGTAGCCGGGGAGGCAGAGGTGCTGAGCATATTTGAGCTTAAAGGAAGGAGCAAGTCCAAGGGGCCTGATGTGAAGATAGCCGGGTGTCGGGTTATCGATGGCTGTGTGACGAAATTGGGAACCATGAGGCTTCTGAGGAGTGGAGAAGTGATGTTTGAAGGAAACTGTGCGTCTCTGAGAAGGGAAACGCAGGACGTGGAGGCAGTGAAGAAGGGAAGTGAGTGTGGACTGGTAATAAGTGACTGGCAAGATTTCCAGGTTGGAGATGTCATGTCATCCAGTGCTTGGAACAAGTGA 2037 0.4659 MLGLYTYEWRGESLEERCGFERERIYMNFARALTAVPSRHFARSCSSSTFAAKSVYASAGCLTEFISHSSAGAAGFCNGTKEHGIRYRRRFHANPELWARRNEELFGLKTPKKEKRVRRDCKNQPPVEAPYVPRNVVKSTKSILDKTIEIFEGMTIAELAKRTGKSASSLQGTLVNVGEKVESEFEPLSVDIAELVAMEVGVNVKRLHSTEGAEIAPRPAVVTVMGHVDHGKTSLLDSLRQTSVAAKEAGGITQYLGAFVVAMPSGASITFLDTPGHAAFSAMRARGAAVTDVVVLVVAADDGVMPQTLEAISHAKAANVPIVVAINKCDKPGANPERVKLQLASEGLLLEEMGGDIQVVEVSATMKTGLDNLEEALLLQAEMMDLKARIDGPAQAYVVEARLDKGRGPLVAAIVKAGTLVCGQYVVIGSEWGKIRGIREVTGKLTDRATPACLLRLKGFGGLPWLVMMLLLFNQRSVHDCLVLRVELSIVVKADVQGTVQAVTDALRTLNSSQVFVNFVHVGVGPISESDVDLAQACGACIVGFNVKSPPSPISQAAGRANIKIGNLIIEKAPGTSETQVAGEAEVLSIFELKGRSKSKGPDVKIAGCRVIDGCVTKLGTMRLLRSGEVMFEGNCASLRRETQDVEAVKKGSECGLVISDWQDFQVGDVMSSSAWNK 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0086 678 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 217 387 IPR000795 GO:0003924|GO:0005525
Lele08g0086 678 TIGRFAM small_GTP: small GTP-binding protein domain 220 373 IPR005225 GO:0005525
Lele08g0086 678 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 217 387 IPR027417 -
Lele08g0086 678 FunFam Translation initiation factor IF-2 214 389 - -
Lele08g0086 678 SUPERFAMILY Translation proteins 391 462 IPR009000 -
Lele08g0086 678 CDD mtIF2_IVc 583 670 - -
Lele08g0086 678 FunFam Translation initiation factor IF-2 578 676 - -
Lele08g0086 678 Gene3D Translation factors 577 677 - -
Lele08g0086 678 Pfam Elongation factor Tu GTP binding domain 222 378 IPR000795 GO:0003924|GO:0005525
Lele08g0086 678 FunFam Translation initiation factor IF-2 485 571 - -
Lele08g0086 678 Pfam Translation-initiation factor 2 486 565 IPR023115 -
Lele08g0086 678 CDD IF2_eIF5B 221 384 - -
Lele08g0086 678 SUPERFAMILY Initiation factor IF2/eIF5b, domain 3 483 565 IPR036925 -
Lele08g0086 678 Gene3D Translation factors 390 478 - -
Lele08g0086 678 Gene3D - 215 389 IPR027417 -
Lele08g0086 678 SUPERFAMILY Translation proteins 578 671 IPR009000 -
Lele08g0086 678 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 114 671 IPR015760 -
Lele08g0086 678 Gene3D - 486 567 IPR036925 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0086 Lele-ChrLele08 506818 511218 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g0086 218 548 Eukaryotic Initiation Factors Gene Family AT1G21160 28.434 1.70e-22 101
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0265 05 1491519 1495049 Lele08g0086 08 506818 511218 hybridization
Lele06g0084 06 531714 536311 Lele08g0086 08 506818 511218 hybridization