Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0078 ATGAAAGAACGTCAAAGAGCAGTTTGTTTGGATGGAACATTACCTGGTTATCATTTGCATCTAGGGCATGGATCAGGAGCAAACAGCTGGCTCATCCACTTAGAGGGGGGTGGTTGGTGTAATAATGTTAGATCATGTGTTTACCGGACGACAACGAGACGTGGATCATCAAATTTCATGGAAAAGGAAGTCCCTTTTACAGGAATATTAAGCAACAATGCTGAACAAAATCCAGATTTTTTCAACTGGAACAGAGTGAGGCTTCGTTATTGTGATGGCGGTTCTTTTACTGGGGATAGTGAAGATAAGACTTATAAACTGAAATTTAGAGGTGAACGCATTTGGTTTGCTGCAATGGAAGATTTGATGTCAGAGGGAATGCGTCATGCCAAGCAGGCTCTTCTTTCTGGATGCTCAGCTGGTGGTCTGGCTGCTATTATACACTGTGATAAATTTCATGGTCTCTTTCCGAGTACCACTAGAGTGAAGTGTTTGAGTGACGCTGGCTTATTTCTTGATGTGCCCGACGTCTCAGGTGGTCGTACTCTCAGAGATCTATATGGTGGTGTTGTAGGATTGCAGAGGATGCAGAAGAATCTGCCGCGAATTTGTACCGACCACCTTGATCCCACTTCATGTTTCTTCCCTCAGAACTTGATCGCCAGTGTTAGGACCCCACTATTCATTCTCAATGCGGCCTATGATACATGGCAGATACAATCCAGCATAGCTCCTCCATCAGCAGATCCCCAGGGCTATTGGCATCATTGCAGATTAAACCATGATAAATGTAATAGAGATCAGATCAAGTTTCTGCAAGGATTCAGGAATCGAATGCTGAATGCCGTTAGAGACTTCTCGAGATCAAGCCATAATGGATTGTTTATAAATTCTTGTTTCTCTCACTGCCAAACCGAGAGGCAGGATACGTGGTTTGCCCACAATTCTCCTGTCATTGGGAAAAAGGGAATCGCAGAGGCTGTTGGGGATTGGTATTTTGAGCGAGGAGGGGTAAAAGAAGCCATTGATTGTGCATACCCTTGCGATAAGACATGCCACCATCTGGTTTTCGAATGA 1077 0.442 MKERQRAVCLDGTLPGYHLHLGHGSGANSWLIHLEGGGWCNNVRSCVYRTTTRRGSSNFMEKEVPFTGILSNNAEQNPDFFNWNRVRLRYCDGGSFTGDSEDKTYKLKFRGERIWFAAMEDLMSEGMRHAKQALLSGCSAGGLAAIIHCDKFHGLFPSTTRVKCLSDAGLFLDVPDVSGGRTLRDLYGGVVGLQRMQKNLPRICTDHLDPTSCFFPQNLIASVRTPLFILNAAYDTWQIQSSIAPPSADPQGYWHHCRLNHDKCNRDQIKFLQGFRNRMLNAVRDFSRSSHNGLFINSCFSHCQTERQDTWFAHNSPVIGKKGIAEAVGDWYFERGGVKEAIDCAYPCDKTCHHLVFE 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0078 358 Pfam Pectinacetylesterase 4 336 IPR004963 GO:0016787
Lele08g0078 358 PANTHER NOTUM-RELATED 5 354 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0078 Lele-ChrLele08 464473 471223 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g0078 7 358 Carbohydrate Esterase AT1G57590 72.727 0.0 561
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele07g0273 07 1500119 1502504 Lele08g0078 08 464473 471223 ECH
Lele06g0075 06 490521 493086 Lele08g0078 08 464473 471223 ECH
Lele08g0078 08 464473 471223 Lele06g0075 06 490521 493086 ECH
Lele08g0078 08 464473 471223 Lele07g0273 07 1500119 1502504 ECH
Lele08g0078 08 464473 471223 Lele08g0078 08 464473 471223 ECH
Lele06g0075 06 490521 493086 Lele08g0078 08 464473 471223 hybridization