Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0077 ATGGGAAGACACTCTTGCTGTTACAAGCAGAAACTCAGGAAGGGCCTCTGGTCTCCGGAGGAAGACGAGAAGCTTCTCAATTACATCACCACGCATGGCCATGGATGTTGGAGCTCCGTCCCCAAACTTGCCGGCTTGCAGAGGTGTGGCAAGAGCTGCAGGTTGAGGTGGATAAATTACCTGAGGCCTGATTTGAAAAGAGGAGCATTCTCGCAGCAGGAAGAGGAATTGATAATTGAACTCCATGCAGTCCTCGGCAACAGGTGGTCACAGATTGCAGCTCAGTTACCAGGAAGAACTGACAATGAGATTAAGAACCTATGGAATTCGTGCCTCAAGAAGAAGCTCAGGCAAAGAGGCATTGACCCCAACACCCACAAGCCACTCTCTGAGGTTGAGAACAAGGACAAGCACCCCTCAGCCGACAAAAGCCATCACAAAGAACTGAGTGTAGCAGAGCCTGCAAAACCAAAGCCAAATGCCATGCCACATGAAGTTCCTGCCGCCTCCAAGATCAGCAATTTGACCAGCAGCCGACCCACCCAGGATTTGTTCCTTGATAGCTCCATTACCAGTTGTGGTCCTTCTGATATGATGGGTTACTTCTCTTTTCAGCACTTGAACTATCCACCCCATGTTGGCCTCTCCGCAAATCCCAACGCCTCCCTTTGCTTCATGTCAGGTTCCAGTTCCTCTCAGGTGATGTCAGACCTCAATTCTAGTATGACTCCCGCCATGCTGAATTCTCTGCCAAGCTCAATTTTCCAGACAACACATGTAAGTACCACGGTTAGTATCCAGTCTGATAATCCTTCCATATCCTCTGGCGATATTGATGGGGTTCAGAACTGGGAAGCTAGTGTCCTTGCTAACAACGCAAGCAAAAGCAATGGGTGCAGTGGGAGTATCCAATTGCAAAGCAGCAGCAACTTCCTTGAGAACAACAGTTTAGCATGGGGATTGACAGACACTGTGAAGGCTGATAAAGATGTTCAAGTACCCCTACAAGCAGAACAAGAAGACTTTAAATGGTCTGAGTATCTAAACACACCATTTTTTCTAGGAAACGCAGCACAGAATCAAAACTGTCAGTCTATTTACAGTGAGGTTAAACCAGAGACAGGCTTCATAACTGATGAATCAAGTACCAGCTGGCACCACACCCAGCATCCGTCCGTTTTCCAAACTTCAGACATCTACACCAAGGATCTGCAAAGATTCTCAGTGGCTTTTGGACAAACCCTGTAG 1248 0.4768 MGRHSCCYKQKLRKGLWSPEEDEKLLNYITTHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFSQQEEELIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCLKKKLRQRGIDPNTHKPLSEVENKDKHPSADKSHHKELSVAEPAKPKPNAMPHEVPAASKISNLTSSRPTQDLFLDSSITSCGPSDMMGYFSFQHLNYPPHVGLSANPNASLCFMSGSSSSQVMSDLNSSMTPAMLNSLPSSIFQTTHVSTTVSIQSDNPSISSGDIDGVQNWEASVLANNASKSNGCSGSIQLQSSSNFLENNSLAWGLTDTVKADKDVQVPLQAEQEDFKWSEYLNTPFFLGNAAQNQNCQSIYSEVKPETGFITDESSTSWHHTQHPSVFQTSDIYTKDLQRFSVAFGQTL 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0077 415 PANTHER MYB DOMAIN PROTEIN 55 1 299 - -
Lele08g0077 415 FunFam MYB transcription factor 68 140 - -
Lele08g0077 415 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Lele08g0077 415 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Lele08g0077 415 MobiDBLite consensus disorder prediction 119 164 - -
Lele08g0077 415 CDD SANT 17 61 IPR001005 -
Lele08g0077 415 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Lele08g0077 415 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Lele08g0077 415 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Lele08g0077 415 CDD SANT 69 109 IPR001005 -
Lele08g0077 415 Gene3D - 68 148 - -
Lele08g0077 415 SMART sant 66 114 IPR001005 -
Lele08g0077 415 SMART sant 13 63 IPR001005 -
Lele08g0077 415 FunFam Myb transcription factor 11 67 - -
Lele08g0077 415 Gene3D - 11 67 - -
Lele08g0077 415 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Lele08g0077 415 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Lele08g0077 415 MobiDBLite consensus disorder prediction 119 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0077 Lele-ChrLele08 458911 460356 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g0077 1 415 MYB Transcription Factor Family AT1G09540 48.598 7.98e-122 356
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele08g0077 Myb_DNA-binding 1.3e-14 CL0123