Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele08g0072 | ATGGCTAGAAACAGAGGGTCTCTTGCATATCTCTCCGACAACACTGCAAGGAAAACAACATATAAGAAAAGGAAGAAGGGTCTTTTCAAAAAGGTGAATGAACTAGCCACTCTCTGTGGGATCCAGGCGTGCGCTGTTGTTCTCAGCTCCTATGAAACTAAACCAGAGGTCTGGCCGGATCCAAGAGGAGCTCAACAGGTAATCGCAAGGTTCCAGAAGACACTTGGGCGGGATGAAACAAGGAATCTGAACCAGGAGAGTTTTACTAGGCAAAGGATTGCCAAAGTTGGTGCCCATATAAAAAAGCAGCGTGTAGAAATCAAAAGAAGGCCCAATAAACTCGTGCCTGCCTCAGCTCAAGTGGATGTGAGCCAAATTGCGTTACGTGTAAATTCTGTTTATGGGCCTATCCTATCGGGCTTTAACTTTGTCATGGCCGAATGGGCAAGAGCAAACAGAGCAACCCATCTAAAAATGGGCCGGATCAATAGAGCTCATTTGTCATTCCAAGAGTTCTGGAAAGACAGGACAGAGAAGGAATCTGGCAAGACTGCTGGCTCTGTACATGTTAATGAAGAAGATTTCTCAATTGTTAACGTGGGAGGCTACATGCAACATGCTATGTTTTGA | 630 | 0.4524 | MARNRGSLAYLSDNTARKTTYKKRKKGLFKKVNELATLCGIQACAVVLSSYETKPEVWPDPRGAQQVIARFQKTLGRDETRNLNQESFTRQRIAKVGAHIKKQRVEIKRRPNKLVPASAQVDVSQIALRVNSVYGPILSGFNFVMAEWARANRATHLKMGRINRAHLSFQEFWKDRTEKESGKTAGSVHVNEEDFSIVNVGGYMQHAMF | 209 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele08g0072 | 209 | ProSiteProfiles | MADS-box domain profile. | 1 | 50 | IPR002100 | GO:0003677|GO:0046983 | |
Lele08g0072 | 209 | SMART | madsneu2 | 1 | 60 | IPR002100 | GO:0003677|GO:0046983 | |
Lele08g0072 | 209 | Pfam | SRF-type transcription factor (DNA-binding and dimerisation domain) | 12 | 50 | IPR002100 | GO:0003677|GO:0046983 | |
Lele08g0072 | 209 | Gene3D | - | 13 | 95 | IPR036879 | GO:0003677|GO:0046983 | |
Lele08g0072 | 209 | PRINTS | MADS domain signature | 23 | 38 | IPR002100 | GO:0003677|GO:0046983 | |
Lele08g0072 | 209 | PRINTS | MADS domain signature | 3 | 23 | IPR002100 | GO:0003677|GO:0046983 | |
Lele08g0072 | 209 | PANTHER | MADS BOX PROTEIN | 11 | 100 | - | - | |
Lele08g0072 | 209 | SUPERFAMILY | SRF-like | 1 | 82 | IPR036879 | GO:0003677|GO:0046983 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele08g0072 | Lele-ChrLele08 | 420812 | 423838 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele08g0072 | 3 | 106 | Type I MADS-box Gene Family | AT1G65330 | 43.810 | 3.74e-25 | 97.4 |