Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0069 ATGGCTAGTTCTGGTGTTCTAGAACAATGTCGAAATAATGCTTCTGTCAAAGTGGTCGTAGTAGCATTTTGCCAGAAAATTCTGTTGCCTAAAGTTAGAAATGTGGTAGCTAGTGGGGATATCTTTAAGGAAGTAAAGAAGTTTTCAGATGTTTTAAGAGCCTCTTGCACTGTGGAGGATTCTGGGATTGCAGATCGCTTTAGTTGCTTGGTTCAAATGGATTATCCATGGACCAATGGTTGGCAGGACACTGGTACTCATGACAGGAGGCAAATCAGAAAGGGAAAGGCATCCCAGGAATCCTTTACTGAAGATTCGGAAGAGGATTTTCAATTGCCTATCAATCATAGGCCAACAGAAAATGTTGATCTAGACAATGTTGAACAAGCATCTCTGGACACACATTTAACATCCTCTAACATTGGATTTAAGCTACTTCAAAAGATGGGGTGGAAAGGAAAGGGTCTGGGGAAGAATGAGCAAGGAATTATTGAGCCAATAAAATCTGGTATTAGAGACCCCAGATTGGGTGTGGGTAAACAAGAAGAAGATGATTTTTTCACTGCTGAAGAAAACATCCAGCGAAAGAAACTTGATGTAGAGTTGGATGAGACAGAGGAAAATATGAGGAAACGAGAGGTTTTGGCTGAACGTGAGCAAAAAATTCAAACTGAAGTGAATGAAATCCGAAAGGTGTTTTTTTGTGAACTGTGCAACAAGCAATACAAATTGGCCATGGAATTTGAAGCACACTTGAGCTCATATGATCACAATCACAGGAAGCGTTTCAAAGAAATGAAGGAGATGCATGGTAGTAGCAGCCGAGATGATAGGCAAAAAAGAGAGCAGCAGCGTCAAGAGAGGGAAATGGCTAAGTTTGCCCAAATGGCTGATGCTCAAAAGCAGCAACAGCTGCAACAACAAGAAGAATCTGGATCTGCTTCGGTTTCCTCTGAATCTAGAACTGCCACTGCACTTGCAGAACAGGATCAGCGGAAGACTTTGAAGTTTGGGTTTTCCTCCAAGGGAAGTGCTTCCAAGAGCTCATTCGGTGGGGCTGCAAAGAAGCAAAAAGGCGCCATGTCTTCTATATTCAGTGCCGATGCTGATGAAGAATAA 1119 0.4218 MASSGVLEQCRNNASVKVVVVAFCQKILLPKVRNVVASGDIFKEVKKFSDVLRASCTVEDSGIADRFSCLVQMDYPWTNGWQDTGTHDRRQIRKGKASQESFTEDSEEDFQLPINHRPTENVDLDNVEQASLDTHLTSSNIGFKLLQKMGWKGKGLGKNEQGIIEPIKSGIRDPRLGVGKQEEDDFFTAEENIQRKKLDVELDETEENMRKREVLAEREQKIQTEVNEIRKVFFCELCNKQYKLAMEFEAHLSSYDHNHRKRFKEMKEMHGSSSRDDRQKREQQRQEREMAKFAQMADAQKQQQLQQQEESGSASVSSESRTATALAEQDQRKTLKFGFSSKGSASKSSFGGAAKKQKGAMSSIFSADADEE 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0069 372 PANTHER FINGER DOMAIN PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G04180)-RELATED 73 372 - -
Lele08g0069 372 Pfam G-patch domain 139 179 IPR000467 GO:0003676
Lele08g0069 372 Coils Coil 188 215 - -
Lele08g0069 372 MobiDBLite consensus disorder prediction 266 294 - -
Lele08g0069 372 MobiDBLite consensus disorder prediction 297 351 - -
Lele08g0069 372 Pfam Zinc-finger double-stranded RNA-binding 233 260 IPR022755 -
Lele08g0069 372 ProSiteProfiles G-patch domain profile. 138 183 IPR000467 GO:0003676
Lele08g0069 372 MobiDBLite consensus disorder prediction 266 372 - -
Lele08g0069 372 MobiDBLite consensus disorder prediction 86 109 - -
Lele08g0069 372 MobiDBLite consensus disorder prediction 82 109 - -
Lele08g0069 372 ProSitePatterns Zinc finger C2H2 type domain signature. 235 257 IPR013087 -
Lele08g0069 372 SMART G-patch_5 136 181 IPR000467 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0069 Lele-ChrLele08 405950 411979 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g0069 73 372 C2H2 Transcription Factor Family AT5G26610 64.474 1.14e-121 352