Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0059 ATGGGAGGAGGTGGAGCGACGCCGGACGCGGAGGCACAGTACTCGTCGGCGAAGATTTCTGTGTGGTGGGACATCGAGAACTGCCATGTCCCCAAGGGCTGCGATCCGCACGCAATCGCCCAGAACATCAGCTCGGCGCTGGTTCAGATGAATTATTGTGGCCCCGTTTCCATCTCCGCCTACGGCGATACTACTCGCATCGCAGCTTCTGCACAGCAAGCTCTCTCCAGTACCGGAATCTCCCTCAATCATGTCCCGGCTGGTGTTAAAGACGCTAGCGACAAAAAGATTCTTGTTGATATGCTGTTTTGGGCTGTGGATAATCCTGCACCTGCTAATTATCTATTAATTTCCGGTGATCGAGACTTCTCTAACGCACTGCATCAGTTGCGGATGAGGAGATATAATATCCTTCTTGCACAGCCTCAGAAAGCATCTGCACCCCTAGTTGCAGCTGCCAAGAGTGTGTGGCTTTGGACTAGTCTCTTAGCTGGAGGACCTCCTCTAACAAATGGTGAATCACAACAATTTGTTAGTAATAGCAACTTATCGAGTTCTGACACTTTACAAATCCCAGTCTCTAGTTCTGTTCAGACAAAGCAGAAGAGGGATTCCTGTGCTGAAGTTCATGTAGGAAATCACAATCATAATCATAATCATAAATTTCCAAATGCTGGAAGGGGATTAGATTCTAGATACCAGGGTAAAACAAATTGGAGAAGCCCTAGTCAACCAAATGGACCCAGACCATTGAACCAACCAGTTGGACTTCAAGAAAATCATAGCAGTATAAACTCTCACCGACCTGGCAACTACAGTCCAAATGTTCCCCCAAATGGATCTGCTCCAAATTTTGTGCATGGCAGTCCAGGTCAGTTATGGAGCAATAGCAGCAATCTACCAGGCAATAGCCAAATGCCTTATTCACAGCCATTAAGACCCAACAGTTATTCGATGCAACCTGATTTTGCACCTAACCATCAACATCCAACAAATACCCATTCTTTTGCAGCTCCAGCAGTGCCTCCTAGACCTGGTGGACCCAAGTTCACCTCAGGAGCACTCACAAATGTGCCAGATATAGGTAATTTGAACATATCTGGATTGCCAAAACAGAATCCTATCAATAATGCTCCTCATCCTATCAATATTCTGGACCATGCTCACTCTTTTGGTCCAGAATATCCACCTACATCTATGGCAGCAATGGGTAATAATAACCCTCCTGGTAATGGCATGTGGGGATCTTCAGGATGTCCTAAACCTTCTGAATATGTACAAGGGCTTATAGGGGTTGTTTTGCTTGCCTTGAACACATTAAAAAATGAAAAGATAAGGCCAACTGAGGCAAATATAGCTGATTGCATCCGTTATGGAGATCCTAAACACCGCACCACTGATGTTAAGAAGGCTTTGGACTGCGCTATTGAACAACAGATGGTGGTCAAACAGAAGTTAGGTGCTTTGCAATTGTATATTGGTAAGAATAGTAAACTTTGGAAGTGTGTAAATCCTATAAGTGGTAAGCCCAATCGACACTCGAAAGAAATATGGGATCAAATGCAAAAATTTTTAACCACTCCTTCTGGAAGACTTGCAATAATGGGTACTCAATGCAAATATGAAGCAGGTACTGTGATAAAGAATATGTGCTTAAAAAATGTTTCTTTGGGAGATGTTCTTCAGATTTTGAACATGGTGATTGCTCATAAAAAATGGATCACGCACCGTCAGTCAGGATGGCAACCACTTGCCATCACTCTACCTGAGGCAAACTCTGATTTAGGTGTCACAGCCGAAATAAATGCATAG 1812 0.4415 MGGGGATPDAEAQYSSAKISVWWDIENCHVPKGCDPHAIAQNISSALVQMNYCGPVSISAYGDTTRIAASAQQALSSTGISLNHVPAGVKDASDKKILVDMLFWAVDNPAPANYLLISGDRDFSNALHQLRMRRYNILLAQPQKASAPLVAAAKSVWLWTSLLAGGPPLTNGESQQFVSNSNLSSSDTLQIPVSSSVQTKQKRDSCAEVHVGNHNHNHNHKFPNAGRGLDSRYQGKTNWRSPSQPNGPRPLNQPVGLQENHSSINSHRPGNYSPNVPPNGSAPNFVHGSPGQLWSNSSNLPGNSQMPYSQPLRPNSYSMQPDFAPNHQHPTNTHSFAAPAVPPRPGGPKFTSGALTNVPDIGNLNISGLPKQNPINNAPHPINILDHAHSFGPEYPPTSMAAMGNNNPPGNGMWGSSGCPKPSEYVQGLIGVVLLALNTLKNEKIRPTEANIADCIRYGDPKHRTTDVKKALDCAIEQQMVVKQKLGALQLYIGKNSKLWKCVNPISGKPNRHSKEIWDQMQKFLTTPSGRLAIMGTQCKYEAGTVIKNMCLKNVSLGDVLQILNMVIAHKKWITHRQSGWQPLAITLPEANSDLGVTAEINA 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0059 603 MobiDBLite consensus disorder prediction 211 328 - -
Lele08g0059 603 Gene3D - 10 161 - -
Lele08g0059 603 PANTHER LIMKAIN B LKAP 14 483 IPR024768 GO:0005777|GO:0010468|GO:1903231
Lele08g0059 603 CDD PIN_limkain_b1_N_like 18 142 - -
Lele08g0059 603 Pfam OST-HTH Associated domain 538 593 IPR025677 -
Lele08g0059 603 Pfam NYN domain 18 154 IPR021139 GO:0004540
Lele08g0059 603 MobiDBLite consensus disorder prediction 234 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0059 Lele-ChrLele08 364683 367553 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g0059 10 201 C2H2 Transcription Factor Family AT5G61190 70.103 5.78e-84 281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele07g0255 07 1391416 1394263 Lele08g0059 08 364683 367553 ECH
Lele08g0059 08 364683 367553 Lele08g0059 08 364683 367553 ECH
Lele05g0243 05 1358391 1361272 Lele08g0059 08 364683 367553 hybridization
Lele06g0059 06 391977 394885 Lele08g0059 08 364683 367553 hybridization