Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0054 ATGGGTGCTGATCTTAATGTTGAACTATCCAAGAAAACATCCCTTTTTGGGCTTAAAGTTTGGGAAATACTTGGAATTGCTGTTGGACTGTTTATAGTAGTTATCCTCGTGCTCTCTGTTTGCCTTACTTCGCGGAAGAAATCAAGAAAAGCCAAGGGTAGGATTCCCCTTAGCCAAATACCAACCATCTCGAAGGATATCAAGGAAGTGAGGGTTGAGCAAGTACCAGCAAATGGATTTGTTCCTCGTGATGGAATTCTTCTCACGATACATGACAAATCCAGTGACAAAGAATCTGACAAAGTTATGGTCCATCTGGGTTTGGGGGGGATGAAAAATGGGGATAGTAGCAGTTATTCTGATTCATTCAATCACTTAGAGAAAGATGGTGGATCGCAGTCAGGAGAGGAAGGGAGCTCTGGCACTTTCCCAGTGTATAAGCACTCTTCTTCATACCCTATAACAGCTCCTTCCCCTCTGTCTGGTCTACCGGAGTTCTCTCACTTGGGTTGGGGCCACTGGTTTACATTGAGGGACCTTGAAATTGCTACGAACCGGTTTTCCAAAGAGAATGTGATTGGTGAGGGTGGCTATGGAGTTGTATATCGGGGACAGCTGATCAATGGGAAGCCAGTGGCAATTAAAAAGATACTCAATAACATTGGTCAAGCTGAGAAAGAATTTAGAGTGGAAGTTGAAGCTATTGGCCATGTACGGCATAAGAATTTGGTTCGCCTTCTGGGTTTCTGCATTGAGGGGACGCACAGGATGTTAGTCTATGAGTATGTCAAGAATGGAAACTTGGAGCAGTGGCTCCATGGAGCTATGCGGCATCATGGATATCTTACATGGGAAGCGCGAATGAAGATTCTTCTTGGCACGGCCAAAGCTCTTGCATATTTTCATGAAGCCATTGAGCCAAAGGTGGTGCACCGAGATATCAAGTCAAGCAACATATTAGTCGATGATGATTTTAATGCCAAGGTTTCTGATTTTGGCTTGGCCAAACTGCTGGGTGCTGGAAAGAGTCATGTCACAACACGAGTTATGGGAACCTTTGGATACGTGGCTCCTGAATATGCAAATACTGGCCTTCTAAATGAAAAGAGTGATGTTTATAGCTTTGGTGTTGTGCTCTTGGAAGCAATCACTGGAAGAGATCCAGTTGACTATGGTCGACCAACTCATGAAGTTAATCTGGTTGATTGGCTGAAGATAATGGTTGGAAGCAGGCGATCAGAAGAAGTGGTTGACCCAAATATCGAGGCGAAGCCCTCCACCCGAGCTTTAAAACGAGCCCTCTTGACTGCATTGAGATGTGTAGATCCTGATTCTGAGAAGAGACCCAAGATGGGCCCAGTTGTACGGATGCTGGAGTCCCATGAGTACCCTTTAGCTAGAGAGGACCGAAGGCAGCGAAGAAACCAAGGGGATAATAGCATGGAAATTGAATCCCAAAAGGAATATTCAGACACAGATAGATCAGAGAGCAGAGGATAA 1500 0.4487 MGADLNVELSKKTSLFGLKVWEILGIAVGLFIVVILVLSVCLTSRKKSRKAKGRIPLSQIPTISKDIKEVRVEQVPANGFVPRDGILLTIHDKSSDKESDKVMVHLGLGGMKNGDSSSYSDSFNHLEKDGGSQSGEEGSSGTFPVYKHSSSYPITAPSPLSGLPEFSHLGWGHWFTLRDLEIATNRFSKENVIGEGGYGVVYRGQLINGKPVAIKKILNNIGQAEKEFRVEVEAIGHVRHKNLVRLLGFCIEGTHRMLVYEYVKNGNLEQWLHGAMRHHGYLTWEARMKILLGTAKALAYFHEAIEPKVVHRDIKSSNILVDDDFNAKVSDFGLAKLLGAGKSHVTTRVMGTFGYVAPEYANTGLLNEKSDVYSFGVVLLEAITGRDPVDYGRPTHEVNLVDWLKIMVGSRRSEEVVDPNIEAKPSTRALKRALLTALRCVDPDSEKRPKMGPVVRMLESHEYPLAREDRRQRRNQGDNSMEIESQKEYSDTDRSESRG 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0054 499 FunFam Putative receptor-like protein kinase 169 262 - -
Lele08g0054 499 SMART serkin_6 187 464 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele08g0054 499 Gene3D Phosphorylase Kinase; domain 1 169 262 - -
Lele08g0054 499 PANTHER OS01G0323000 PROTEIN 5 490 - -
Lele08g0054 499 ProSitePatterns Protein kinases ATP-binding region signature. 193 216 IPR017441 GO:0005524
Lele08g0054 499 Pfam Protein kinase domain 188 451 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele08g0054 499 ProSiteProfiles Protein kinase domain profile. 187 464 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele08g0054 499 CDD STKc_IRAK 193 459 - -
Lele08g0054 499 MobiDBLite consensus disorder prediction 119 142 - -
Lele08g0054 499 ProSitePatterns Serine/Threonine protein kinases active-site signature. 309 321 IPR008271 GO:0004672|GO:0006468
Lele08g0054 499 Gene3D Transferase(Phosphotransferase) domain 1 263 476 - -
Lele08g0054 499 FunFam Putative receptor-like serine/threonine-protein kinase 263 474 - -
Lele08g0054 499 SUPERFAMILY Protein kinase-like (PK-like) 171 466 IPR011009 -
Lele08g0054 499 MobiDBLite consensus disorder prediction 443 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0054 Lele-ChrLele08 337209 339737 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g0054 17 460 Trihelix Transcription Factor Family AT1G70460 40.312 1.08e-93 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Lele08g0054 Pkinase 4.4e-47 CL0016