Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0040 ATGTCCGACAACGAGGATTGCACGAACCAATATGGTGTCCTCCTCTACTATAAGTATGCTCAAATTCCTAACCTCGATCACCTCCTCACTTGCTACGAGTCTAATTGCTCCTCCCTTGGCCTCCTTGGTCGCGTTCGTCTCTCCTCCCAGGGCGTCAATGTCACTGTTGGTGGCAAGTTATCCTCTCTAGAAAGACACATTGAAAGAGTCAAGGCTGATAGCTTATTTGAAGGGATTGATTTCAAGCTTGCTGCATGTCATCAACCATTAAACGACAAGGTTGCAAAAGAAAGCGGATTTACTTCTCTTTCAGTTCGAATTGTCAAGGAGCTGGTTACTCTTAGTTCTCATCCCTTGCTAAAACCACCAGAAATTTCAAACGCTGGGAGACATCTCTCTGCAGTTGAGTTTCATTCTGTCCTACAGAATGCTGCCAAGGAGAGTCCGGCAGATGGCCTTGTCTTACTTGATGCAAGGAATCTTTATGAGACAAGAATTGGGAAATTTCATGCACCAAATGTTCAAACTTTGGATCCACAAGTTAGACAATACAGTGATCTGCCATCATGGATAGATGGTATTGCACTGGCGGAATCAGATGTGAAATGGCATCAGCATATATTAGGTCAAAAGGTTTGGGCTTTGAGAATGTGTTTCAGCTATTTGGTGGGATACAACGATACTGAGCAATTTCCAGATGGTGGTTTCTTTAAAGGAAAGAATTTTGTTTTTGATCATCGTAGTGAAATGGTAAAGCTGAAAACGGCTGAAAATGAACGGATTAATGAAGCTGCAACCTATGTTTGTGAGTTGTGCCAACAACAGGGCAAGGCTGCAAGGATGATGCAGCTAACCGAAGTTATTGAAGCAGAAACACCACTGCCAGATGTTGAGTTTCAAAACGTTCCATTGGATACTACTTTTTCATCTCATGCCTCAGAAAGATGTCGTGTTGCAGATGTCAGGTCGGCAAGAAAACTCAGAATCTTGTGCTTGCATGGATTTCGGCAGAATGCATCAGGGTTTAAAGGAAGAACAGCATCATTAGCCAAAAAAATAAAGAAAATTGCCGACTTATTTTTTATAGATGCGCCTCATGAGTTGCCATATATTTATCAACCCCCAGTGTTGGAACAGCATACAAATTGTGCATCAACTTCGTTGCCCTCAAGTCCGCCTCCACCTTCGGAGAATTGTAAGAAGAAATTTGCATGGTTTGTGCCACCCAACTTTGACAGAAGAGGTAGAGCTGATTGGAAGGTAGCCGATGGCCCATTTGATCCACTTCAATACCAGCAGCAAACTGATGGACATGATATTTCCCTAGCTCATTTGAAGGCCGTGTTTGTTCAAGAAGGGCCTTTTGATGGAATATTGGGATTTTCACAGGGTGCAGCAATGGCTGCATTAATCTCTGCACAACAAGAGAAGCTTAAAGGTGAAATGGACTTCAGATTTGTTATATTGTGCTCAGGCTTTGCTGTCCATAGAAAGGAGATGGACTGCGAGTTGATCAAATGCCCTTCTCTTCACATTTATGGTAATGAACACGGTAATGACAGGCAGATAGCCAACCAAGCTAGCAAGGAACTTGCTTCCCTGTATGATGGAAGTAGTTTGGTTACTGTTGAACATGATTGTGGTCATATAATTCGTACGCGGTCTCCTTTTGGTGGCAATATCAAAAGACAATGCGAGAAGAAAGTACTGGTGCTGCCACAGAAACAAGTTGCCCAGGGGAAACTCAAGGGCAATTTCAAATATAGACAATTATATGAACCCCACCAATGTGAGGGAAACCGCCGTGCAGAAAAAAGGAAGCAAGCTCGATCCAAACTCGGAAGTGGGAAGATGTCTCTCGTGACGGAGGAATTGAAAGCTAAAGCAGAGGTGTACCGTGGCGACGAGCTGTGCCAGGAGAAGTCAAAGTTTTTGCTGAAGGAAGTAGGGCTTCCGAACGGGCTTTTGCCTCTGAAAGACATGGAAGAATGCGGGTATGTGAAAGAAACAGGGTTCGTGTGGCTGAAGCAGAAGAAGAGCACCACCCACAAGTTCGACAAGATCGGGAAGCTGGTTTCTTATGCCCCTGAGGTCACCGCTCATGTTGAGCATGGCAAGATCAAGAAGCTCAATGGCGTGAAGACCAAGGAGCTCTTGGTCTGGATCACGCTCAGTGATATCTTTGTGGATGACCCTCCCACTGGCAAAATTACATTTAAGACCCCGGCTGGCCTCTTCAGGTCCTTCCCGGTTTCTGCCTTCGAGATTGAGGAGAAGGAGAAAGATGGCAAGGAAGGTAAAGAGGCTGCTGCGGCTACGCCCGTGGAAGTTAAAGAGGTCTGA 2343 0.4486 MSDNEDCTNQYGVLLYYKYAQIPNLDHLLTCYESNCSSLGLLGRVRLSSQGVNVTVGGKLSSLERHIERVKADSLFEGIDFKLAACHQPLNDKVAKESGFTSLSVRIVKELVTLSSHPLLKPPEISNAGRHLSAVEFHSVLQNAAKESPADGLVLLDARNLYETRIGKFHAPNVQTLDPQVRQYSDLPSWIDGIALAESDVKWHQHILGQKVWALRMCFSYLVGYNDTEQFPDGGFFKGKNFVFDHRSEMVKLKTAENERINEAATYVCELCQQQGKAARMMQLTEVIEAETPLPDVEFQNVPLDTTFSSHASERCRVADVRSARKLRILCLHGFRQNASGFKGRTASLAKKIKKIADLFFIDAPHELPYIYQPPVLEQHTNCASTSLPSSPPPPSENCKKKFAWFVPPNFDRRGRADWKVADGPFDPLQYQQQTDGHDISLAHLKAVFVQEGPFDGILGFSQGAAMAALISAQQEKLKGEMDFRFVILCSGFAVHRKEMDCELIKCPSLHIYGNEHGNDRQIANQASKELASLYDGSSLVTVEHDCGHIIRTRSPFGGNIKRQCEKKVLVLPQKQVAQGKLKGNFKYRQLYEPHQCEGNRRAEKRKQARSKLGSGKMSLVTEELKAKAEVYRGDELCQEKSKFLLKEVGLPNGLLPLKDMEECGYVKETGFVWLKQKKSTTHKFDKIGKLVSYAPEVTAHVEHGKIKKLNGVKTKELLVWITLSDIFVDDPPTGKITFKTPAGLFRSFPVSAFEIEEKEKDGKEGKEAAAATPVEVKEV 780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0040 780 FunFam Rhodanese-like domain-containing protein 6 2 112 - -
Lele08g0040 780 Gene3D - 622 763 IPR036758 -
Lele08g0040 780 Pfam UPF0176 acylphosphatase like domain 12 110 IPR040503 -
Lele08g0040 780 MobiDBLite consensus disorder prediction 758 780 - -
Lele08g0040 780 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 229 564 IPR020936 -
Lele08g0040 780 Gene3D alpha/beta hydrolase 323 569 IPR029058 -
Lele08g0040 780 Pfam Serine hydrolase (FSH1) 325 551 IPR005645 -
Lele08g0040 780 Pfam Protein of unknown function, DUF538 645 755 IPR007493 -
Lele08g0040 780 Gene3D - 1 112 - -
Lele08g0040 780 FunFam esterase OVCA2 isoform X6 323 569 - -
Lele08g0040 780 SUPERFAMILY alpha/beta-Hydrolases 323 551 IPR029058 -
Lele08g0040 780 SUPERFAMILY At5g01610-like 618 761 IPR036758 -
Lele08g0040 780 Gene3D - 121 207 IPR036873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0040 Lele-ChrLele08 272628 279519 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g0040 10 562 Sulfurtransferasese or Rhodanese AT1G09280 50.828 0.0 559
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g2217 13 28514554 28518843 Lele08g0040 08 272628 279519 CCT
Lele14g2152 14 26899718 26908835 Lele08g0040 08 272628 279519 CCT
Lele15g0195 15 1152153 1156574 Lele08g0040 08 272628 279519 CCT
Lele16g0205 16 1163032 1167323 Lele08g0040 08 272628 279519 CCT
Lele08g0040 08 272628 279519 Lele08g0040 08 272628 279519 ECH
Lele06g0041 06 301712 302434 Lele08g0040 08 272628 279519 hybridization