Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0038 ATGCGATTCTTTATTGCATCCTTTATACTTAAGGATTCTCTATGCAAGTTAAACTGTTCCAAGGGAGTTATTCCTAAAGTGGAACCTCAGACCTCGCCCATGGAATCAACTGCTTCCAGGGGTTCTGTGGGGACTCCAGCACCGGAGAAAACTGCTCCTGATGATAGTATTACTGAATCGCAGATTCCCTGTTTCCGCCTCTATTATATGGCGTCTTTGCAGCCTGACTTAGATTCTGTTCATTCCGATTCGTTGCCGCGACCCAGTCTCAAAGAGCGCACCGATTTTGGGTCCGATTCTAACCACCACAATTCTCTCCACGCCGTTCGATGGAGATCCGACACGGAGCGTCGGATCTACTCATCCAAGCTCGTCGATGCTCTGCGCCACGTCCTCCGTCGCAGTACTTCTCTCCCGGCCAAACCTAGCGGCGGTCGTGAAATTCGTGAGACAGCTGATAGAGTTCTAGCCGCGGCGGCCAAGGGCAGAACTCGATGGAGTCGAGCGATTCTGGCTTCTCCGCTCGGCCGTTGGAGATTGCAGAGGCAACACAAGAAGGTGAAGAAGATGACAAGAGGATTGAAGAAACCGGAGATTAGGAGAGAGAGAAGGAGGTTACCGGCTCTGCAGAAGAAAGCGCGCGTTCTCGGCCGATTAGTTCCTGGTTGCCGTAAGGTCTCCTTTCCGAATCTTCTGGAAGAAGCCACTGATTATATATCTGCCTTGGAGATGCAAGTTCGAGCCATGACGGCACTCACCGAATTGCTCGCCGGGCGTGGCGCGCCTGCCGATCGACTCTTGGGGCCTCGACTGTAA 816 0.527 MRFFIASFILKDSLCKLNCSKGVIPKVEPQTSPMESTASRGSVGTPAPEKTAPDDSITESQIPCFRLYYMASLQPDLDSVHSDSLPRPSLKERTDFGSDSNHHNSLHAVRWRSDTERRIYSSKLVDALRHVLRRSTSLPAKPSGGREIRETADRVLAAAAKGRTRWSRAILASPLGRWRLQRQHKKVKKMTRGLKKPEIRRERRRLPALQKKARVLGRLVPGCRKVSFPNLLEEATDYISALEMQVRAMTALTELLAGRGAPADRLLGPRL 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0038 271 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 193 242 IPR011598 GO:0046983
Lele08g0038 271 MobiDBLite consensus disorder prediction 85 103 - -
Lele08g0038 271 MobiDBLite consensus disorder prediction 26 56 - -
Lele08g0038 271 MobiDBLite consensus disorder prediction 30 44 - -
Lele08g0038 271 CDD bHLH_AtIBH1_like 200 253 IPR044549 GO:0006355
Lele08g0038 271 Gene3D - 180 260 IPR036638 GO:0046983
Lele08g0038 271 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 112 256 IPR044660 GO:0006355
Lele08g0038 271 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 195 259 IPR036638 GO:0046983
Lele08g0038 271 MobiDBLite consensus disorder prediction 80 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0038 Lele-ChrLele08 260834 264558 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g0038 70 249 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G09250 44.737 5.62e-41 139
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele07g0233 07 1290358 1290963 Lele08g0038 08 260834 264558 ECH
Lele08g0038 08 260834 264558 Lele08g0038 08 260834 264558 ECH
Lele05g0227 05 1270686 1271294 Lele08g0038 08 260834 264558 hybridization
Lele06g0038 06 284710 285297 Lele08g0038 08 260834 264558 hybridization