Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0033 ATGACCGTAAAGCGCCATGGCCCCACATGGGACCCACTGGTGCTCATAAATACAGATCCCTCCCTCCCCAAGGGTTCACCGTCCCTCCAACATCCAAAACGGCATTTTTCCTTTAGGGACAGACACAGACGACTCTGTCAAACAAAAATAAAGCACCCTGCCCCTGCTCATAGTGTCGACATGGTGAGCCAGGAAGATTTGTTGATCGCTAAGATCTGTGAGCTCCACGATAAGATCTCCAACCTCGAAAGTCTCAAACCCGGCCAAAATGTCGACACCCTTTTTACCCAACTCGTTCTCACATGCATACCACCCAACCCTATCGATGTCACTAAGCTCCCCACAAGCCTTCAGGATATTCGATCCAAACTCATTCGTCTCTGCGGCGAAGCCGAAGGCCTCCTTGAGAGCCATTACTCCACCATCCTCGGCACCTTCGACAACCCCCTCGACCACCTCGATATCTTCCCTTATTACTCCAACTACCTTAAACTCGGTCTCCTCGAGTTCACCATCCTCACGCAGCACTGCACCCGTGCCCCTTCCAACATAGCCTTCGTTGGCTCTGGTCCTCTTCCTTTCACTTCGATTGTCTTGGCCTCCAATCACCTCCCCACCACCACCTTCCATAACTATGACATCGACCCTCAGGCCAATTCCATGGCGGTTCGCTTGTTTTCTTCTGATAATGATTTGTCCAAACGCATGGTTTTTCACACTAGCGACATCTTGGACGTGACCAAGGAGTTGGAAGAGTACGAGGTTGTTTATTTGGCGGCACTTGTGGGGATGGACAGTGACGAGAAGAATCGGGTGATCGATCATTTGGCTAAGTATATGGCTCCAGGAGCGGTTCTGATGCTGAGGAGTGCCCATGGAGCTCGTGCTTTTCTGTACCCTGTGGTGGAGCCTGACGATCTTCGAGGCTTTGAGGTTCTCTCTGTGTTTCATCCGACCGACGAGGTTATCAATTCTGTCGTCATAGCAAGAAAGTATCCCCTGCCTCTACAACACTCGCATGATCAGCAAGCTGGTCTTCCAAATATGATATTTCCCAACAAGTGTTCTGAGATACAAGCGTTTAATCCCCTCGTCAACCATAGGAATATGATAGAGGAGTTGACCGTTGAGGAACAGCTATCGTAA 1146 0.5009 MTVKRHGPTWDPLVLINTDPSLPKGSPSLQHPKRHFSFRDRHRRLCQTKIKHPAPAHSVDMVSQEDLLIAKICELHDKISNLESLKPGQNVDTLFTQLVLTCIPPNPIDVTKLPTSLQDIRSKLIRLCGEAEGLLESHYSTILGTFDNPLDHLDIFPYYSNYLKLGLLEFTILTQHCTRAPSNIAFVGSGPLPFTSIVLASNHLPTTTFHNYDIDPQANSMAVRLFSSDNDLSKRMVFHTSDILDVTKELEEYEVVYLAALVGMDSDEKNRVIDHLAKYMAPGAVLMLRSAHGARAFLYPVVEPDDLRGFEVLSVFHPTDEVINSVVIARKYPLPLQHSHDQQAGLPNMIFPNKCSEIQAFNPLVNHRNMIEELTVEEQLS 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0033 381 PANTHER NICOTIANAMINE SYNTHASE 3 63 374 IPR004298 GO:0030410|GO:0030418
Lele08g0033 381 Pfam Nicotianamine synthase protein 64 332 IPR004298 GO:0030410|GO:0030418
Lele08g0033 381 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 60 336 IPR004298 GO:0030410|GO:0030418
Lele08g0033 381 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 174 292 IPR029063 -
Lele08g0033 381 Gene3D Vaccinia Virus protein VP39 67 333 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0033 Lele-ChrLele08 191615 192760 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g0033 61 378 Nicotianamine Synthase Gene Family AT5G04950 57.764 1.42e-131 378
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele08g0033 08 191615 192760 Lele14g2158 14 26931884 26936655 CCT
Lele08g0033 08 191615 192760 Lele16g0199 16 1131883 1133857 CCT
Lele08g0033 08 191615 192760 Lele08g0033 08 191615 192760 ECH
Lele05g0221 05 1218872 1219837 Lele08g0033 08 191615 192760 hybridization