Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0020 ATGGTATCTCAAAGGAAATCTCATCAGCTGGCCGGTAAGGGTAGGGATCATCAAGTTCCAATTCAAGGAAGACGTGGCGATTCAAGGCGACCTGCGATCAGTGATCTTGAAAACATTATAAACGGACTCTTGATGAAGGACCTGGATTCCTACTTGGAACCTTTCCTGCGAAGAGTGGTACGACAAGAGGTGGAACGTAAAATACAGGAATACCTATTTCCAAGAACAACGCCTTGTCAGGGTGTCGCATCTGGCACCAAATCCTTAGAGCTGCGTTTTATTAATAATCCTCCTGAAACAATATTCACACTCTCTAAAGTCATAGCTGACGACGAGGAGACACCACTTCAGATTGCTCTTTTTGATGTGAGATCTCAATCTGTGGTGAGCAATGGTCCTTTATCCTCTGCAAAGGTAGAGATCTTCGCCCTCGACGGTGATTTCTGTTCCCAAAGGTGTGAAGATTGGACTGAAGAACAATTCAATGCAAATATCTTACCCCCAAGGGAGGGTAAGGAGCCATTACTGAATGGAGATCGGATCGTTACACTAGAAAATGGGATTGGTTGTATCACTAAAATTAAGATCACTGACAATTCGAGGTGGAGAAGGAGCGGAAAGTTCATCTTGGGAGCCAAGGTTTTGCAACTAACTTCCTGCGGAGCAAGCATCAAGGAAGGTGTAAGCAAACCTTTCGTGGTAAAAGATAACAGAGGAGAGCGGTACAAGAAACATCACCCTCCACATTTGGATGATGATGTATGGCGTTTGGAGAAGATAGCCAAAAATGGTAAAATTTACCGGCGACTATGTGCCCATGGAATAAGGAAAGTTAGGGATCTTGTTCGGTCTTACAACATTGACCCATCTTCTTTGCTTGAGAAAGTTGGCAAAATTCCTGGGAAGTCATGGGAGAAAATTACTGAACATGCGAAGGAATGTGTTATAGATGATTACAACCTTTACATGTATTACACAGCAGAACAACCAGTAGGCCTGCTCTTCAATTGTATTTACATCCTTGTAGGAGTGACGCTTGATGGCCAAAACTACTGTTCTCCAGATACTCTTGCCCCTGCTGAAAAGCGTGTGGTGGAAGTGGTGAAGCAGCATGCTTACAGAAATCTGAATGATTTGAAATCAGTTGGTGATCAGACACGTGTTAACTTTCAGAGGTCACTTGCATATCCACAAGCTGGGAAGGCTAGTGGTCCAGATCAAGGTCTCCAACAGCTCCATTTCCCAATTGCACAGCAAGGTCAAATTGAAATATGGGCAGGTTCTGATCAACCATCCACTTCATATGCCGATGAAGGAATGCAATATGATCCCCAGATATATGCAAGTCCATTTCCAGAATTGGCACCAATGCTACAGAACAGTTTAGCAGAAGGTGAATTCTTCCCTGGAATGCAAATCGAAGGGAATAGTTGGCCCCATGTTGGATCGCCTTGGATAGAGAACGAAAACCCACATATTCAATTCACAAACTGGGGGCAAGAATATGGCCTACATTTCAATTCATATGGTGGAGCAGAGTTTGGCAGAAGTGAGAAACCAAAAGCTGTGTGGTATAAGATTCTAATCGCTCTCAAATGGGTCATATCAGTAAGAAGGGATGCAGCTGCTAAAAAGATGACAAAGCTATTTTACTATAACTAA 1662 0.4326 MVSQRKSHQLAGKGRDHQVPIQGRRGDSRRPAISDLENIINGLLMKDLDSYLEPFLRRVVRQEVERKIQEYLFPRTTPCQGVASGTKSLELRFINNPPETIFTLSKVIADDEETPLQIALFDVRSQSVVSNGPLSSAKVEIFALDGDFCSQRCEDWTEEQFNANILPPREGKEPLLNGDRIVTLENGIGCITKIKITDNSRWRRSGKFILGAKVLQLTSCGASIKEGVSKPFVVKDNRGERYKKHHPPHLDDDVWRLEKIAKNGKIYRRLCAHGIRKVRDLVRSYNIDPSSLLEKVGKIPGKSWEKITEHAKECVIDDYNLYMYYTAEQPVGLLFNCIYILVGVTLDGQNYCSPDTLAPAEKRVVEVVKQHAYRNLNDLKSVGDQTRVNFQRSLAYPQAGKASGPDQGLQQLHFPIAQQGQIEIWAGSDQPSTSYADEGMQYDPQIYASPFPELAPMLQNSLAEGEFFPGMQIEGNSWPHVGSPWIENENPHIQFTNWGQEYGLHFNSYGGAEFGRSEKPKAVWYKILIALKWVISVRRDAAAKKMTKLFYYN 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0020 553 Pfam Calmodulin binding protein C-terminal domain 321 381 IPR046829 -
Lele08g0020 553 Pfam Calmodulin binding protein central domain 250 314 IPR046830 -
Lele08g0020 553 MobiDBLite consensus disorder prediction 1 30 - -
Lele08g0020 553 MobiDBLite consensus disorder prediction 9 30 - -
Lele08g0020 553 PANTHER OS02G0177800 PROTEIN 43 441 IPR012416 GO:0005516
Lele08g0020 553 Pfam Calmodulin binding protein-like N-terminal domain 89 237 IPR046831 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0020 Lele-ChrLele08 123948 126926 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g0020 52 414 Calmodulin-binding Proteins AT5G26920 42.432 1.23e-80 257
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0211 05 1154785 1158704 Lele08g0020 08 123948 126926 hybridization