Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele08g0019 | ATGGCTATTTTGTGCATAAAATTAAAACCAAAAGCCAAAACCCCAGTGTCCGAAAGGAACATTTCCTTGATATTGCAAAATAAATTCATCTTTTCCGGTGATCTTGTTCCTCCTCTCGCAGATTCCCACTTCAACTCTATATTGTCCCAGATGGTAAAGGGGGGAAAGGTTGGTGGCAAACGCAATTTCAGAAAAAGGGTTCGGTCAAAGGAAGGGGGTTCTGATGATTCGGATGAGGACTATGTGGTTCCGGATGAAGATAGAGATTTGTCTGATTGTTCGGAAGATTCATTGTCTTCTTTAGATGGATGTGCATCCGAGGAGAGTTTTGATAACTTTGTAGGGGATGAGGAGGAGGAAGTTGAAGTAAGGAGGCAATTTAATAGACCCAAGACAAAAACTGGCATTTGTGGCCGGCAGAAAATTGGCAGGAAACCCTCACAACAGATAGGAAGGATAACTTATTCACATCAACGAGAAGAAGATAAAGAAGAAGAACTAGAACAAGAAGACAGAGAAGAAGAAGAACGAGAACGAGAAGAGGAATATGATGAAGATACAGATGAATATGAGGAAGATGATGCTGATGAAGATTTCGATTGTGATGAGGATGAGGAATTTACAGCCGAGGAAGAGGATTACTCAGATGAGGAAGAAATAAAGGGGAGAAAGAAGAAAAGTAATGGGATAAAAATGGGCAAGAAGGTTGCTCAGAAGCGGGCCTCTGTAACTTATACTAGAGGTCGTAAAAGAAGAAAGAATTCTAGAGCTGCAAGGAAGCCCTTGAAAAAGAGGAGAAGAAAGAATGGAGGGTTGAGGAGGAAAGCAAAGTATGATGATGAGGGTGATTTTATAGATAACGGTCCTACCATCAGAACCAAGAGTACAAAAAAACCAGGACAAAAAAGGAGAAGACTAATAGTTGATTCAGATTCATTCTCAGATTGTGTGTCATCTAGATCATCTGATTATGAGTATACCATCTCTGAAGAAGAGAGAGAACTGGTGAGGGAAGCTGAGGAATTGTGTGGATTGAGAACTAATTTGAGGAGTTCATCCCTTCTAACAAAACATGAAGAGGATGGATTCCATGAAGATCCACATCAGCAAAGAAAGCCTCCAGCCCGCAAAGGTAAGGAAAAGCTAGAGGAACATCAGGGGAGAAAGGGCAAGGACAAGGTAGAGGATTTAAAAAGTGAACCAGGAAAGCAGGTGTGTGGAATTTGTCTCTCTGAAGAAGATAAAAGAAGAGTAAGAGGAGTACTAGATTGTTGTACACACTTTTTTTGTTTTGCTTGCATTATGGAATGGGCAAAAGTGGAATCTCGCTGCCCTTTGTGCAAGCAGAGATTTAGAGCAATCAGTAAGCCTGCACGATCAACAACAGCGGGGGTTGATTTGAGAGGATCAGTTATACAAGTCCCCGAACGTGATCAGGTTTATCAGCCCTCTGAAGAAGAACTCAGGAGCTATATTGATCCATATGAGTATGTAATTTGTTCAGAGTGCCATCAGGGTGGAGACGATGACCTCATGTTACTGTGTGATCTCTGTGACTCTCCTGCACACACATATTGTGTTGGTCTGGGTCGGGAGGTACCTGAAGGCAATTGGTATTGTGATGGTTGTAGGCCAGTTGCTTTGGGATCTTCAAGTTCTCAAATTCAGGAAGGTGTGGCTGATTCAAGGGCAACAACAGTTCAGAGCCTACCTGGTAGACCATCGCCTGCTGTACATGCAAGAGAAATTATTGACCTCAACTTGATGTCCTCACCGAGTGCAGCTTTTAGTCAAGGGTTGGGGAATTTTTCTTCTAGATTTTCTGGTAGAAGTGTTGAAGGAGCTTCTCCAGTGTCTGGAGGAGGGGCACCAACTTTATCTGAGAGACGTTGGATACACCGTCAAATTCAACAATTACTTTCAATGGATAGAATGACTTCTGCTGCTGGTCGATCTAATGGCATTTCAGCTACCAATTCAACTAGTAACCTATGTGGCTCTCAAAATGATCAAAGTAGGGTAACAACCACTCAAGACACAAGAATACAGAATGTGGGAACATCGTCATATCACTCATTTTTTGAGGAAAGATTATGCAACAGTTCGTCTCCACTAATGCAGAATGGGGATCATTTCTCTATGAGAATAAGCAATTCAAGAAGGCCAGTAGTTCAAGATTCAACTCCATTTACCAACAGAGCTGTGATTGGGGCATTTTGGCCTGGTCTTGTGGGGACGCCTCCTGTATCAGATTATGAACAAGTCCATCAGCTTAGCAGCAGTTCACACATTGTTGCTGATGGTACCGTGTCCCCTGCTATTAGAGAAGAGAGTAACTTTCACATAGTAAAGGAACAATTGTCATCACTGGTTAAACGCCATCTCATGGACTTGTCACAAAATATTGATTTAGGCAACAGTACCATCAAGGACATTGCAAGGATTTCTCTGAACACCATACTAGCAGCTTGTGGTCTTGAGCACAAGAAGAGCGAGGTTTGCGCTGTGCCCCCTCCTTCAGCCTGTCCCCACATTGAACTGATGGCTGGTGGGCAAACGAGTCTGATTAAAGGTTGCTGCTCATCTTGCTTTGATTCTTTTGTAGGAGACGTGGTTAAGAGGATCATGGACACTAGAATGCCGCAGTGGTTGCGACTAGGCCTTTAG | 2667 | 0.4286 | MAILCIKLKPKAKTPVSERNISLILQNKFIFSGDLVPPLADSHFNSILSQMVKGGKVGGKRNFRKRVRSKEGGSDDSDEDYVVPDEDRDLSDCSEDSLSSLDGCASEESFDNFVGDEEEEVEVRRQFNRPKTKTGICGRQKIGRKPSQQIGRITYSHQREEDKEEELEQEDREEEEREREEEYDEDTDEYEEDDADEDFDCDEDEEFTAEEEDYSDEEEIKGRKKKSNGIKMGKKVAQKRASVTYTRGRKRRKNSRAARKPLKKRRRKNGGLRRKAKYDDEGDFIDNGPTIRTKSTKKPGQKRRRLIVDSDSFSDCVSSRSSDYEYTISEEERELVREAEELCGLRTNLRSSSLLTKHEEDGFHEDPHQQRKPPARKGKEKLEEHQGRKGKDKVEDLKSEPGKQVCGICLSEEDKRRVRGVLDCCTHFFCFACIMEWAKVESRCPLCKQRFRAISKPARSTTAGVDLRGSVIQVPERDQVYQPSEEELRSYIDPYEYVICSECHQGGDDDLMLLCDLCDSPAHTYCVGLGREVPEGNWYCDGCRPVALGSSSSQIQEGVADSRATTVQSLPGRPSPAVHAREIIDLNLMSSPSAAFSQGLGNFSSRFSGRSVEGASPVSGGGAPTLSERRWIHRQIQQLLSMDRMTSAAGRSNGISATNSTSNLCGSQNDQSRVTTTQDTRIQNVGTSSYHSFFEERLCNSSSPLMQNGDHFSMRISNSRRPVVQDSTPFTNRAVIGAFWPGLVGTPPVSDYEQVHQLSSSSHIVADGTVSPAIREESNFHIVKEQLSSLVKRHLMDLSQNIDLGNSTIKDIARISLNTILAACGLEHKKSEVCAVPPPSACPHIELMAGGQTSLIKGCCSSCFDSFVGDVVKRIMDTRMPQWLRLGL | 888 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele08g0019 | 888 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 382 | 466 | IPR013083 | - | |
Lele08g0019 | 888 | Coils | Coil | 157 | 193 | - | - | |
Lele08g0019 | 888 | CDD | RING-HC_Topors | 406 | 448 | - | - | |
Lele08g0019 | 888 | MobiDBLite | consensus disorder prediction | 244 | 272 | - | - | |
Lele08g0019 | 888 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 472 | 547 | IPR013083 | - | |
Lele08g0019 | 888 | MobiDBLite | consensus disorder prediction | 63 | 105 | - | - | |
Lele08g0019 | 888 | SMART | PHD_3 | 499 | 544 | IPR001965 | - | |
Lele08g0019 | 888 | Pfam | Ring finger domain | 405 | 448 | IPR001841 | - | |
Lele08g0019 | 888 | SMART | ring_2 | 406 | 447 | IPR001841 | - | |
Lele08g0019 | 888 | Pfam | PHD-finger | 499 | 545 | IPR019787 | - | |
Lele08g0019 | 888 | MobiDBLite | consensus disorder prediction | 655 | 677 | - | - | |
Lele08g0019 | 888 | MobiDBLite | consensus disorder prediction | 78 | 92 | - | - | |
Lele08g0019 | 888 | SUPERFAMILY | FYVE/PHD zinc finger | 469 | 545 | IPR011011 | - | |
Lele08g0019 | 888 | MobiDBLite | consensus disorder prediction | 360 | 396 | - | - | |
Lele08g0019 | 888 | MobiDBLite | consensus disorder prediction | 132 | 322 | - | - | |
Lele08g0019 | 888 | ProSitePatterns | Zinc finger RING-type signature. | 425 | 434 | IPR017907 | - | |
Lele08g0019 | 888 | MobiDBLite | consensus disorder prediction | 273 | 287 | - | - | |
Lele08g0019 | 888 | ProSiteProfiles | Zinc finger RING-type profile. | 406 | 448 | IPR001841 | - | |
Lele08g0019 | 888 | ProSiteProfiles | Zinc finger PHD-type profile. | 497 | 546 | IPR019787 | - | |
Lele08g0019 | 888 | SUPERFAMILY | RING/U-box | 405 | 453 | - | - | |
Lele08g0019 | 888 | MobiDBLite | consensus disorder prediction | 164 | 216 | - | - | |
Lele08g0019 | 888 | PANTHER | F18C1.6 PROTEIN | 51 | 878 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele08g0019 | Lele-ChrLele08 | 106338 | 110142 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele08g0019 | 494 | 543 | C2H2 Transcription Factor Family | AT3G01460 | 48.077 | 5.66e-09 | 58.5 |