Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0017 ATGAGTAAGACCGAATTACCAGGGACGAAGGCACCACTTGTTCCTTTGGCAACTTTGATTGGCCGCGAGCTTCGAAATGAAAAAGTTGAAAAACCTTTTGTGAGGTATGGACAGGCTGGCTTGGCAAAGAAAGGGGAGGATTACTTTTTGGTCAAGACAGACTGCCAGAGGATTCCTGGGGATTCATCAACACTGTTTTCTGTTTTTGCGATCTTTGATGGGCATAATGGTATATCAGCTGCTATTTTTACAAAGGAAAATTTACTAAATAATGTTATGAGTGCAATACCACAAGATATCAGCAGAGATGAGTGGCTTCAAGCTCTTCCTCGGGCTCTAGTTGTTGGGTTTGTGAAAACTGACATAGAATTTCAGAAAAAAGGCGAGACTTCTGGGACTACAGCAACATTTGTTCTGGTTGATGGTTGGACTGTCACTGTTGCATCTGTTGGGGATTCCCGATGTATATTAGATACCCAGGGAGGTGTAGTGTCACTTCTGACAGTTGATCACAGACTGGAAGAGAATGCAGAAGAGAGGGAACGTGTTACTGCTAGTGGCGGTGAAGTAGGAAGACTCAACGTATTTGGAGGCAATGAGGTAGGACCACTTCGCTGCTGGCCTGGTGGATTGTGTCTTTCTAGATCGATTGGTGACACAGATGTGGGAGAATTTATTGTGCCAATTCCACATGTTAAGCAAGTGAAGCTTTCAAATGCTGGTGGAAGGCTTATCATAGCTTCTGATGGCATTTGGGATACTTTATCTTCTGAAATGGCTGCCAAGTCTTGTCGGGGGCTACCTGCAGAGCTTGCTGCAAAGCTAGTAGTTAAGGAGGCTTTAAGGTCAAGGGGACTGAAGGATGATACAACTTGCCTTGTTGTAGACATTATTCCTTCAGACCATCCTGTATTACCCCCAATTCCAAAAAAGAAACATAATATGATAACTTCACTTCTCTTTGGAAAGAAATCTCAGAGGTCCACAAACAAAGCTAGTAATAAGCTTTCTGCTGTGGGAGTTGTAGAGGAGTTATTTGAGGAGGGTTCTGCAATGCTTGCAGAAAGGCTCGGTAAGGATTTTCCTTTGGATGCGAACTCTGGGATTTTCCGTTGTGTAGTCTGCCAGGTGGATCAACCTACTGGCGATGGTTTATCAGTGAACTCTGGACCTTTTTTCTCGCCAGCATCAAAGCCATGGGAAGGCCCATTCCTCTGTGCTAACTGTCGAAGGAAGAAAGATGCCATGGAAGGAAAAAGGCCTAGCAGACCCACAGTGACAGCATAG 1287 0.4452 MSKTELPGTKAPLVPLATLIGRELRNEKVEKPFVRYGQAGLAKKGEDYFLVKTDCQRIPGDSSTLFSVFAIFDGHNGISAAIFTKENLLNNVMSAIPQDISRDEWLQALPRALVVGFVKTDIEFQKKGETSGTTATFVLVDGWTVTVASVGDSRCILDTQGGVVSLLTVDHRLEENAEERERVTASGGEVGRLNVFGGNEVGPLRCWPGGLCLSRSIGDTDVGEFIVPIPHVKQVKLSNAGGRLIIASDGIWDTLSSEMAAKSCRGLPAELAAKLVVKEALRSRGLKDDTTCLVVDIIPSDHPVLPPIPKKKHNMITSLLFGKKSQRSTNKASNKLSAVGVVEELFEEGSAMLAERLGKDFPLDANSGIFRCVVCQVDQPTGDGLSVNSGPFFSPASKPWEGPFLCANCRRKKDAMEGKRPSRPTVTA 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0017 428 CDD PP2Cc 43 297 IPR001932 -
Lele08g0017 428 SUPERFAMILY PP2C-like 38 297 IPR036457 -
Lele08g0017 428 SMART PP2C_SIG_2 51 297 IPR001932 -
Lele08g0017 428 Pfam Protein phosphatase 2C 63 280 IPR001932 -
Lele08g0017 428 Gene3D - 33 301 IPR036457 -
Lele08g0017 428 ProSiteProfiles PPM-type phosphatase domain profile. 28 297 IPR001932 -
Lele08g0017 428 FunFam probable protein phosphatase 2C 5 35 302 - -
Lele08g0017 428 PANTHER PROTEIN PHOSPHATASE 46 296 - -
Lele08g0017 428 SMART PP2C_4 25 295 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0017 Lele-ChrLele08 90033 92018 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g0017 1 427 PP2C-type Phosphatase Gene Family AT1G09160 76.581 0.0 664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele08g0017 08 90033 92018 Lele08g0017 08 90033 92018 ECH
Lele05g0208 05 1119358 1122847 Lele08g0017 08 90033 92018 hybridization
Lele06g0016 06 95887 106766 Lele08g0017 08 90033 92018 hybridization