Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0012 ATGGGGCATTTTTCGTCCATGTTCAATGGATTGGCAAGGTCGTTCTCAATAAAGAAAGCCAAGAGGTCTGGGAAATGTGATGGAAGAGAAGCCGCCGAAGCAATGGCCAAGGAAGCTAAGAAAAATGACCAGATTCTCCGCACCTCTGGCACCGTTCATGTCCAGGGCTCCAACAACTTCAGCTCAATTTTTTCCAAGAAAGGCCAGAAAGGAGTCAACCAGGATTGTTGCATAGTTTGGGAGGAATTTGGATGTCAAGAGGACATGATGTTCTGTGGGATATTTGACGGCCACGGGCCATGGGGTCATTTCGTGGCAAAGAGAGTAAGAGAGACCATGGCTCCATCTCTCTTGTGTAACTGGCAGGAGACACTTGCCCAGACCTCGCTAGATCCTGCTTTCGACTTAGAGGATGAGAAAAAGCGACACCCTTTCCATATATGGAAGCACTCCTACTTGAAGACTTGTGCCGCCATTGATCACGAGCTAGGGCGCTCTCGCAAAATTGATTCTTTCTACAGCGGAACCACTGCTCTCTCCATTGTTCGACAGGGTGAGCTAATCGTTGTGGCAAATGTGGGTGACTCTCGGGCTGTATTAGCCACAACTACAGACGATCATAGCTTAGTGCCAGTACAGCTGACTGTTGATTTCAAGCCCAATCTGCCCGAGGAGGCAGAGCGTATAATTCAGTGTCAAGGACGAGTCTTCTGCTTAGAAGACGAACCGGGAGTTCACAGAGTGTGGCTGCCGGACGGAGAGTCGCCAGGACTGGCCATGTCCAGAGCCTTCGGAGACTACTGCGTGAAGGAGTATGGAGTTATTTCTGCTCCTGAGGTAACACACAGGACCATCACCAGCAGAGACCAATTCGTTGTGCTGGCAACAGACGGGGTGTGGGATGTGATATCGAATGAAGAAGCTGTGCGAATAGTGGCTTCAACAGAGGACAGAGGGAAGTCGGCAAGAAGATTGGTGGAGTGCGCGGTGGCGGCTTGGAAGCGCAAGAGACGGGGCTTTGCCATGGATGACATTTCTGCAATTTGTGTATTCTTGCATCCTCCTCCTCCTCTATCTCTCCCCAAAGAGGATTGA 1095 0.5041 MGHFSSMFNGLARSFSIKKAKRSGKCDGREAAEAMAKEAKKNDQILRTSGTVHVQGSNNFSSIFSKKGQKGVNQDCCIVWEEFGCQEDMMFCGIFDGHGPWGHFVAKRVRETMAPSLLCNWQETLAQTSLDPAFDLEDEKKRHPFHIWKHSYLKTCAAIDHELGRSRKIDSFYSGTTALSIVRQGELIVVANVGDSRAVLATTTDDHSLVPVQLTVDFKPNLPEEAERIIQCQGRVFCLEDEPGVHRVWLPDGESPGLAMSRAFGDYCVKEYGVISAPEVTHRTITSRDQFVVLATDGVWDVISNEEAVRIVASTEDRGKSARRLVECAVAAWKRKRRGFAMDDISAICVFLHPPPPLSLPKED 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0012 364 CDD PP2Cc 59 351 IPR001932 -
Lele08g0012 364 FunFam Probable protein phosphatase 2C 34 51 354 - -
Lele08g0012 364 PANTHER PROTEIN PHOSPHATASE 41 350 - -
Lele08g0012 364 ProSiteProfiles PPM-type phosphatase domain profile. 60 352 IPR001932 -
Lele08g0012 364 SUPERFAMILY PP2C-like 51 355 IPR036457 -
Lele08g0012 364 Pfam Protein phosphatase 2C 77 325 IPR001932 -
Lele08g0012 364 Gene3D - 30 353 IPR036457 -
Lele08g0012 364 SMART PP2C_4 54 350 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0012 Lele-ChrLele08 62693 64118 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g0012 1 353 PP2C-type Phosphatase Gene Family AT3G05640 69.014 0.0 521
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g2250 13 28677737 28680628 Lele08g0012 08 62693 64118 CCT
Lele14g2184 14 27029900 27033086 Lele08g0012 08 62693 64118 CCT
Lele15g0162 15 999038 1000200 Lele08g0012 08 62693 64118 CCT
Lele16g0171 16 1017505 1018761 Lele08g0012 08 62693 64118 CCT
Lele08g0012 08 62693 64118 Lele08g0012 08 62693 64118 ECH
Lele05g0203 05 1095429 1096886 Lele08g0012 08 62693 64118 hybridization
Lele06g0011 06 66882 68312 Lele08g0012 08 62693 64118 hybridization