Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0003 ATGGCTGATCGAGAATCTGCCGAGAGAATGAAAAGGCTCGCCATTATCGGCGTGTCTAGTTTCTTGCTTGTGGCCATGGCGGTGGCCGTCACCGTAGGGGTCAGCATGAATCAAAGCGATTTTGACTCAAGCCAACCAAAAGACAACAACAAGTCCCACGTCTCAGATTCCATGAAAGCCGTGACAGAACTGTGCCGTCCCACAGATTACAAAAAAGAGTGCGAGGACAGCATCAAGTCCGAAGCCGGCAACAGCAGCGACCCTAAAGACCTCATCAAGATCGCCTTCAACATCACCATTCGCTCCGTCGGCGAGAGTCTCCAGAGAACCCGTCTCATCCATGAGATCGAGAAAGAACCCAGATCCAAGATGGCTCTTGACTCCTGCATGCATCTCATGGCCATCTCCATCGGCGAGTTCCGAAAGTCCGTCCAAAACATGGGCTCATTTGATCTCACCGACGTCGACAACATGCTCATGAACCTCAAGGTTTGGATCAGCGGCGCCATCGCCTACCAACAGACTTGCTTGGATGGATTTCAGAACACCACCAGCCCTGCCGGTAAACAAATGCAGGATGTTCTGAAACTCACCATGATACACAGCAGCAACATTCTCGCCATCATCAATGACTTCGCCAACAGTCTTGCTCAGCTGAACATAACAAGCTCAACCTCACGTCGACTCCTTCAGGATTTTGAAGCCCACCATCCTGTTTTAGGTCATGGAGATCTCGACATTCCCCTCTGGGCTCAAGCCACTATGAGAAGACTTCTCACCACCGGCAAGCTCAAGCCCAATGTGGTCGTAGCCAAGGATGGGACTGGAAAGGTCAGGAGCATTAACGAAGCCTTGGAAATTGTCCCTTTAAATAATGTGAAGCCATTCATCATCTACGTTAAGCAAGGAGTCTACCATGAGTACGTTCACGTCATGAACAATATGACCCGCGTAATCATGATCGGCGACGGAAGTGACAAGACCCGAATCACCGGTAACAGAAACTTCGTTGATGGCATCGGCACCTTCAGGACCGCCACCTTTGCCGTTGACGGAGATTTCTTTGTTGCCATGAAGATGGGATTTGAGAACTCAGCTGGTGCCAAGAAGCATCAAGCTGTGGCCCTAAGAGTGCAAGGTGATATGGCAGTGTTCTACAAATGCGCCATGGATGGGTACCAGGACACACTTTACGCACACGCGATGCGTCAATTCTATAGGGACTGTACCATTTCAGGTACGGTGGACTTCGTTTTCGGCGACGCCGTGTCGGTGTTCCAGAACTGCACATTTGTGGTGAGGAAGCCATTGGAGGAACAACAATGCATCGTGACAGCACAGGGAAGGAAGGAGAGACGCCAGCCAACGGGAATAGTGATCCAAGGAGGGTCGATCGTAGCCGATCCTAGCTTTTACCCAGATAGGTTCAAGAACAAAGTTTACTTGGCGCGTCCATGGAAGATATACTCAAGAACCATATTCATGGAGACGTTCATGGATGACTTGATCCAGGCTGAAGGGTTTTTGCCGTGGGAAGGCACACTGGGGCTGGACACGTGCTATTATGCAGAGTACAACAATGGCGGCCCAGGTTCTGATAAATCGAAGCGTGTGAAATGGGGCGGCATCAAGAACATCACACCCCAACAAGCAAACACCTACACACCTCTCAACTTCTTCAAGGGGGACAAGTGGATTAAGATTACTCGCATTCCTTACGCCGCTTCCTCTTGGAGCTCCGAAAAACACTGA 1752 0.5034 MADRESAERMKRLAIIGVSSFLLVAMAVAVTVGVSMNQSDFDSSQPKDNNKSHVSDSMKAVTELCRPTDYKKECEDSIKSEAGNSSDPKDLIKIAFNITIRSVGESLQRTRLIHEIEKEPRSKMALDSCMHLMAISIGEFRKSVQNMGSFDLTDVDNMLMNLKVWISGAIAYQQTCLDGFQNTTSPAGKQMQDVLKLTMIHSSNILAIINDFANSLAQLNITSSTSRRLLQDFEAHHPVLGHGDLDIPLWAQATMRRLLTTGKLKPNVVVAKDGTGKVRSINEALEIVPLNNVKPFIIYVKQGVYHEYVHVMNNMTRVIMIGDGSDKTRITGNRNFVDGIGTFRTATFAVDGDFFVAMKMGFENSAGAKKHQAVALRVQGDMAVFYKCAMDGYQDTLYAHAMRQFYRDCTISGTVDFVFGDAVSVFQNCTFVVRKPLEEQQCIVTAQGRKERRQPTGIVIQGGSIVADPSFYPDRFKNKVYLARPWKIYSRTIFMETFMDDLIQAEGFLPWEGTLGLDTCYYAEYNNGGPGSDKSKRVKWGGIKNITPQQANTYTPLNFFKGDKWIKITRIPYAASSWSSEKH 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0003 583 FunFam Pectinesterase 261 577 - -
Lele08g0003 583 MobiDBLite consensus disorder prediction 38 58 - -
Lele08g0003 583 Pfam Pectinesterase 267 563 IPR000070 GO:0030599|GO:0042545
Lele08g0003 583 ProSitePatterns Pectinesterase signature 2. 411 420 IPR033131 -
Lele08g0003 583 SUPERFAMILY Pectin lyase-like 265 573 IPR011050 -
Lele08g0003 583 FunFam Pectinesterase 57 213 - -
Lele08g0003 583 TIGRFAM PME_inhib: pectinesterase inhibitor domain 31 210 IPR006501 GO:0004857
Lele08g0003 583 Pfam Plant invertase/pectin methylesterase inhibitor 60 207 IPR006501 GO:0004857
Lele08g0003 583 Gene3D Invertase/pectin methylesterase inhibitor family protein 56 212 IPR035513 -
Lele08g0003 583 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 59 212 IPR035513 -
Lele08g0003 583 SMART PMEI_2 56 208 IPR006501 GO:0004857
Lele08g0003 583 Gene3D - 261 577 IPR012334 -
Lele08g0003 583 CDD PMEI-like_3 64 214 - -
Lele08g0003 583 PANTHER PECTINESTERASE 20 569 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0003 Lele-ChrLele08 15504 17350 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g0003 5 573 Carbohydrate Esterase AT3G05610 45.375 0.0 568