Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g2861 ATGAAGGTGCAGCCAGACGGAACCGGAGCTGGGGCTGCCTCAGCCGCTGCTCCACCCAACCCTTGCGAAGAAGCAGAGAAGAAGAGCATAAATCCGGAGCTTTGGCATGCTTGTGCGGGGCCGCTGGTGAACCTGCCTCCAGCTGGTACTCACGTGGTGTACTTCCCTCAAGGTCACAGTGAACAGGTTGCAGCATCTTTAAAGAAGGATGTGGATGGTCAGATCCCAAACTATCCAAATCTCCCTTCTAAGTTACTCTGTCTCCTTCACAATGTCACCTTGCATGCTGACCCAGAAACTGACGAAGCATATGCTCAGATGACACTTCAACCAGTGCCTTCTTTTGACAAGGATGCATTGTTAAGATCTGATCTTGCTCTCAAGTCAAGTAAATCCCAGCCTGAGTTCTTCTGTAAACAATTGACGGCGAGTGATACAAGTACACATGGAGGTTTCTCTGTCCCACGCCGTGCAGCAGAGAAGATTTTCCCTGCTCTTGATCACTCTATGCAACCACCTGCTCAAGAACTTGTGGCAAGGGATTTGCACGACAATGTCTGGACATTTCGCCATATATACCGTGGACAACCAAAGCGTCACTTACTTACAACTGGATGGAGTCTATTTGTCAGTGGAAAGAGGCTATTTGCTGGAGACTCTGTTTTGTTTATAAGAGATGAAAGGCAGCAGCTTCTTCTTGGTATCAGGCGAGCTAACGGACAACCCACCAATATATCATCTTCGGTGCTATCAAGTGTTAGTATGCATATTGGAATTCTGGCAGCAGCAGCTCATGCTGCTGCAAACAACAGCCCCTTCACTGTGTTTTATAACCCTAGGGCTAGCCCCTCAGAATTTGTTATTCCTTTAGCAAAGTACTACAAGGCAGTGTATAGCCATCAAATATCACCTGGCATGCGCTTCCGAATGATGTTTGAAACTGAAGACTCAGGAACAAGAAGGTATATGGGTACAATTACTGGGATCTGTGATCTGGATCCTGTAAGATGGAAAAACTCACAATGGTGCAATTTGCAGGTCGGTTGGGATGAATCAACTGCTGGAGAAAGACGAAGTAGGGTTTCAATCTGGGAAATTGAACCAGTGACTGCTCCATTTTTCATCTGTCCACCTCCATTCTTCAGGTCTAAGCGACTAAGACAATCCGGAATGCCTGATGAATATCCTTCTGATTTTGATAACCTTTTTAAGCGGACGATGCCTTGGCTTGGTGATGATATGTGTATGAAGGATCCTCAAGCACTCCCTGGCCTAAGCTTAGTTCAATGGATGAACATGCAGCAAAATCCTGCTCTGTCTAGCTCATTGCAGCCAAATTACATGCAACCCTTGTCTGGATCTGTTCTGCAAAACCTTTCTGGTGCAGATATTGCCCGTCAACTGGGATTTTGTGCTCCACAGATATCTCAGTCAAGCAATGTACCTTTCAATACTCAGAGGTTACTTCAGACCTCAGAACAAGTTGATCATCTTCAGAAGATACCATCCTCGTCTAGCCCATTAGGAACGGTCATGCAGCCACCACAACAATTGGATGATATCACTCAGCAACCTAGACAGAATATAGGAAATCAAACTCTACCTCAGAGTCAAGTTCAGAGCCAACTTCTGCATGCTCAAAATATTGTTCAGCCTAACAATATTCTTCAACAGCAGCAACCATCCATCCAAAACCATCAACTGCATAGAGACCTCTCTCAGAACCTGTCACAGCCGCAGCAGCAACAGACAGTTATGGGTCAGAATCAACAGCAAAATCTTATTCAGTCGCCAATGCCGGATCATTTCAATCAACAGTTGCAGATGTCTGACAACCAGATTCAGCATCAATTATTACGGAAGCTTCAACAGCAACAGCAAACACTCTTGGCACAGCAGTCAGTATTGCAGCAGTCTACTCAACCTCTACTTAATCAAATCCAAGACCAGCAGAGGCAGCTTTTAGACCCAATTCAGAACTTCTCGAGGGACCTAACTTCAAGTCAAGTGCTAGAAATTCCTCCGATACTTCAAAACTCACTTCCTGATTCTAATTCTATTCCACATCAGATGATGAAGAATAAGGGCCAGACCAATAATGTTCAGTTCTCTCATCCAGCCCAGCAGGCAAAGCTTCAACAACAGCAACCTAGAACACTGTCTGAGATGTCTGGGCATGTGGGACTTCCCCCTGCTCCTACTGCCAATAAACTCTCTGCTGCTTGCAGTAGCATATTAACTGGTGCAGCTGGAGCAGGGCAGTCTGTAATTACTGATGACATTCCATCTTGTTCCACTTCACCTTCCACTAATAACTGTGCCAATACTCTTCCACATATGAATTCCCGGATCCATAGGAACAACACGATAGGGGATGATATGGCTCAATCTGCAGCCACGATCTTAAGTCCTAGTGCCTTAGAGACCATGTCATCAAATGCAAGCTTGGTGAAAGATTTTCAGCCAAAGTCTGAAGTTAAGCCTTCTTTAAATATATCCAAAAGTCAAAATCAAGGGAATTTTTCCGCTCATGTATGCTTAAATGGTGGAGCTGCACCGACAGATTATTTGGATACATCATCTTCTACAACTTCAGTTAGCCTTTCTCGGAATGACACTTATATGCATCGGAATAACAACTCATTATCCTACAATCCACAGTCAGTGTTGTTTAGAGACAATAATCAAGATGGGGAAATTCAGCTAGATGCTAGGAGCAATGTTCCATTTGGCAATAATATTGATGGTCAATTGGGAGTGCCCCTAAATCCAGATTCTCTTTTGACCAAAGGCACAATAGGGCTGGAAAAGGATTTGTCAAATAACCTTTCTTCAGGAGGCATGCTTGGTAACTATGAGGATAACAGAGATACTCAGCAGGAACTCTCTTCATCAATTGTTTCACAGACATTTGGAGTCCCTGATATGACCTTTAATTCAATTGATCCCACCATAAATGATAGTAGTTTCTTAAATAGGGGTTCATGGGCACCGCCTCCTCCACCACCACAGTTTCAGCGAATGAGAACCTATACCAAGGTATACAAACGTGGTGCTGTTGGTAGATCTATAGACATAACCCGGTATTCAGGTTATGAGGAGCTTAAACAGGATTTGGCTCGCAGATTTGGCATAGAGGGACAGTTGGAGGACCGGCAAAGGATAGGCTGGAAACTTGTTTATGTAGATCATGAAAATGATGTTTTGCTAGTGGGGGATGACCCTTGGGAGGAGTTTGTGAACTGTGTCCGCTGCATTAATATACTTTCCCCTCAAGAGGTGAAACAGATGAGTTTGGATGGTGATTTTGGCAGCGGTGGCCTTCCAAATCAAGCCTGTAGCAGTTCTGATGGTGGAAATACCTAA 3366 0.4447 MKVQPDGTGAGAASAAAPPNPCEEAEKKSINPELWHACAGPLVNLPPAGTHVVYFPQGHSEQVAASLKKDVDGQIPNYPNLPSKLLCLLHNVTLHADPETDEAYAQMTLQPVPSFDKDALLRSDLALKSSKSQPEFFCKQLTASDTSTHGGFSVPRRAAEKIFPALDHSMQPPAQELVARDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDERQQLLLGIRRANGQPTNISSSVLSSVSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVIPLAKYYKAVYSHQISPGMRFRMMFETEDSGTRRYMGTITGICDLDPVRWKNSQWCNLQVGWDESTAGERRSRVSIWEIEPVTAPFFICPPPFFRSKRLRQSGMPDEYPSDFDNLFKRTMPWLGDDMCMKDPQALPGLSLVQWMNMQQNPALSSSLQPNYMQPLSGSVLQNLSGADIARQLGFCAPQISQSSNVPFNTQRLLQTSEQVDHLQKIPSSSSPLGTVMQPPQQLDDITQQPRQNIGNQTLPQSQVQSQLLHAQNIVQPNNILQQQQPSIQNHQLHRDLSQNLSQPQQQQTVMGQNQQQNLIQSPMPDHFNQQLQMSDNQIQHQLLRKLQQQQQTLLAQQSVLQQSTQPLLNQIQDQQRQLLDPIQNFSRDLTSSQVLEIPPILQNSLPDSNSIPHQMMKNKGQTNNVQFSHPAQQAKLQQQQPRTLSEMSGHVGLPPAPTANKLSAACSSILTGAAGAGQSVITDDIPSCSTSPSTNNCANTLPHMNSRIHRNNTIGDDMAQSAATILSPSALETMSSNASLVKDFQPKSEVKPSLNISKSQNQGNFSAHVCLNGGAAPTDYLDTSSSTTSVSLSRNDTYMHRNNNSLSYNPQSVLFRDNNQDGEIQLDARSNVPFGNNIDGQLGVPLNPDSLLTKGTIGLEKDLSNNLSSGGMLGNYEDNRDTQQELSSSIVSQTFGVPDMTFNSIDPTINDSSFLNRGSWAPPPPPPQFQRMRTYTKVYKRGAVGRSIDITRYSGYEELKQDLARRFGIEGQLEDRQRIGWKLVYVDHENDVLLVGDDPWEEFVNCVRCINILSPQEVKQMSLDGDFGSGGLPNQACSSSDGGNT 1121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g2861 1121 FunFam Auxin response factor 301 372 - -
Lele07g2861 1121 Pfam B3 DNA binding domain 137 238 IPR003340 GO:0003677
Lele07g2861 1121 Gene3D - 1004 1098 - -
Lele07g2861 1121 Gene3D - 301 372 - -
Lele07g2861 1121 SUPERFAMILY CAD & PB1 domains 1022 1088 - -
Lele07g2861 1121 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 26 1098 IPR044835 GO:0003677|GO:0006355|GO:0009725
Lele07g2861 1121 MobiDBLite consensus disorder prediction 1 27 - -
Lele07g2861 1121 Gene3D - 135 238 IPR015300 -
Lele07g2861 1121 ProSiteProfiles B3 DNA-binding domain profile. 137 239 IPR003340 GO:0003677
Lele07g2861 1121 SMART B3_2 137 239 IPR003340 GO:0003677
Lele07g2861 1121 CDD B3_DNA 136 228 IPR003340 GO:0003677
Lele07g2861 1121 ProSiteProfiles PB1 domain profile. 1009 1093 IPR000270 GO:0005515
Lele07g2861 1121 SUPERFAMILY DNA-binding pseudobarrel domain 126 266 IPR015300 -
Lele07g2861 1121 Pfam AUX/IAA family 1009 1093 IPR033389 -
Lele07g2861 1121 FunFam Auxin response factor 1004 1098 - -
Lele07g2861 1121 Pfam Auxin response factor 263 346 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Lele07g2861 1121 FunFam Auxin response factor 135 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g2861 Lele-ChrLele07 33825862 33831831 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g2861 24 484 B3 DNA Binding Superfamily AT1G19220 72.414 0.0 661
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Lele07g2861 B3 1.7e-19 CL0405