Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g2841 ATGGCAAGGAAATGCTCACATTGTGGGAACATAGGCCACAATTCAAGGACATGCTCGTCTATGAGAGGTAGTGCTTTTGTAGGGCTTCGACTCTTCGGTGTTCAACTCGACATATCGTCGTCTTCTTCTTCTTCTTCTTCTTCTTGTGTTGCCGCCATCAAGAAAAGCTTTAGCATGGACTCTTTGCCCTCTTCCTCATCTCCTTCTTCCTCTTTCTCTTCCTCCAGATTGGCCATCGACGACCACTCCGATAGAACCTCCCTCGGCTATCTCTCCGACGGCCTCCTCGGAGTTCCATGGACGGAAGAGGAGCACCGAGCGTTCCTGGTAGGGCTGGAGAAGCTGGGAAAAGGAGACTGGAGAGGAATCTCTAGGAACTATGTGACCACAAGAACCCCTACTCAAGTTGCGAGCCATGCTCAGAAATACTTCCTTCGACTTGCAACTGTTCACAAGAAGAAGCGACGTTCCAGTCTTTTTGATATGGTTGGCAGCAGTCAAGGTCACCATCATCATCCTCCTCCTCCTAAGGCGGTCGGCAATTCAGTGGAGAATATGGACACTGATTTGCAGCTTCTTGGCCTTCAAATGGAAGCCAACAACAACAACAAATCATCAGATGATAACAAGCAAACACGAAAAATTAGCGATAATGATTATAGTTCTCAACAAGCTGGTGCCAAAGTGTTGAAATCTTCCAATGCATCAGCATCACTTGATCTGGAGCTGAGTCTTACCGCCCCCAATAACACTCTCCAGCAGCAAAATAATACCCTTCTTGGTCCAATCATCAGCGTCACTTGA 804 0.4751 MARKCSHCGNIGHNSRTCSSMRGSAFVGLRLFGVQLDISSSSSSSSSSCVAAIKKSFSMDSLPSSSSPSSSFSSSRLAIDDHSDRTSLGYLSDGLLGVPWTEEEHRAFLVGLEKLGKGDWRGISRNYVTTRTPTQVASHAQKYFLRLATVHKKKRRSSLFDMVGSSQGHHHHPPPPKAVGNSVENMDTDLQLLGLQMEANNNNKSSDDNKQTRKISDNDYSSQQAGAKVLKSSNASASLDLELSLTAPNNTLQQQNNTLLGPIISVT 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g2841 267 Gene3D - 98 150 - -
Lele07g2841 267 PANTHER TRANSCRIPTION FACTOR KUA1 3 229 - -
Lele07g2841 267 CDD SANT 99 144 IPR001005 -
Lele07g2841 267 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 98 146 IPR006447 GO:0003677
Lele07g2841 267 MobiDBLite consensus disorder prediction 163 183 - -
Lele07g2841 267 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 92 148 IPR017930 -
Lele07g2841 267 ProSiteProfiles SANT domain profile. 95 148 IPR017884 -
Lele07g2841 267 ProSiteProfiles Myb-like domain profile. 99 144 IPR001005 -
Lele07g2841 267 Pfam Myb-like DNA-binding domain 99 144 IPR001005 -
Lele07g2841 267 MobiDBLite consensus disorder prediction 216 231 - -
Lele07g2841 267 ProSiteProfiles Zinc finger CCHC-type profile. 3 18 IPR001878 GO:0003676|GO:0008270
Lele07g2841 267 MobiDBLite consensus disorder prediction 199 231 - -
Lele07g2841 267 FunFam transcription factor MYB1R1 98 149 - -
Lele07g2841 267 SMART sant 96 146 IPR001005 -
Lele07g2841 267 SUPERFAMILY Homeodomain-like 98 148 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g2841 Lele-ChrLele07 33683487 33684596 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele07g2841 Myb_DNA-binding 2.5e-11 CL0123