Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g2821 ATGGGTCGATCACCATGCTGTGACAAGGTGGGCTTAAAGAAAGGACCTTGGACTCCCGAGGAAGATCAGAAACTCCTAGCTTATATTGATGAACATGGCCATGGAAGCTGGCGTGCCTTGCCTGCAAAAGCTGGCCTCCAGAGGTGTGGCAAGAGCTGCAGGCTGAGGTGGACCAATTATCTTAGGCCTGATATTAAAAGGGGAAAGTTCAGTTTACAAGAAGAACAAACCATCATCCAACTCCATGCTCTCCTAGGAAACAGGTGGTCGGCCATAGCCACGCACTTGCCAAAGAGAACAGATAATGAGATCAAGAACTACTGGAACACGCATCTGAAGAAAAGATTAAGCAAAATGGGAATTGACCCTGTGACCCACAAACCCAAGAATGACGCCCTTGTCCGTCGCGACGGCGGCCAATCCAAGACGGCGGCCAACCTTAGCCACATGGCTCAGTGGGAGAGTGCCAGGCTTGAAGCTGAAGCAAGGTTGGCCAGAGAATCGAAACTACGTTCATCACTATCATCATTTTCATCTTCATCTTCTTCTGCTTCTGCCTCAACTTATTCAGCTTACCCACTTCGCATCAAGCCTTGGAATAATAATAATAATGGTTGCTGGCTAAATAAATCCGCTGATCAAAGTGAGCTTGAATCTCCAAAGTCCACTCTAACTCTCTCTGAGAACGTTAACACGCCACCATCTATTACGCCTATGATTGAGTTCGTGGGCACTTCTTCTGGTTCTTGTGAGTCAGCAGGAAATGTGAAAGAAGAAGGTGGTCATCAGCGAGACCAGTGGAATAATAATCACAGTAATGGTTTAGAGAATTCAATGTCTTTTGCGTTCATTCCCAACATGGAAGCCACATGGACCTCTCAAGGGCCTCTTCTTAGGATTGGTACTGGCGGGGATGACGCTGTTGCAGAATATCAGGGATTCACCAATCTGTTGCTTAATACAAACTCCGACGACCGGAGCTTGTCGGAGGAGGATGGCGGAGGAGGAGAGTCTAACAACTGGGATGGTAGTGGCGGCGGCAGCGGCAGCGGCAGCGGCAGCGGCATCTTGTGTGAAGATAATAAGAACTACTGGAACAGCATTCTCAGTTTAGTTAACCCTAATTCGCCTTCTCATTCCCCCATGTTCTGA 1152 0.4809 MGRSPCCDKVGLKKGPWTPEEDQKLLAYIDEHGHGSWRALPAKAGLQRCGKSCRLRWTNYLRPDIKRGKFSLQEEQTIIQLHALLGNRWSAIATHLPKRTDNEIKNYWNTHLKKRLSKMGIDPVTHKPKNDALVRRDGGQSKTAANLSHMAQWESARLEAEARLARESKLRSSLSSFSSSSSSASASTYSAYPLRIKPWNNNNNGCWLNKSADQSELESPKSTLTLSENVNTPPSITPMIEFVGTSSGSCESAGNVKEEGGHQRDQWNNNHSNGLENSMSFAFIPNMEATWTSQGPLLRIGTGGDDAVAEYQGFTNLLLNTNSDDRSLSEEDGGGGESNNWDGSGGGSGSGSGSGILCEDNKNYWNSILSLVNPNSPSHSPMF 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g2821 383 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Lele07g2821 383 MobiDBLite consensus disorder prediction 320 355 - -
Lele07g2821 383 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 228 - -
Lele07g2821 383 MobiDBLite consensus disorder prediction 247 272 - -
Lele07g2821 383 FunFam MYB-related transcription factor 13 66 - -
Lele07g2821 383 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Lele07g2821 383 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Lele07g2821 383 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Lele07g2821 383 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Lele07g2821 383 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Lele07g2821 383 FunFam MYB transcription factor 69 116 - -
Lele07g2821 383 Gene3D - 68 137 - -
Lele07g2821 383 MobiDBLite consensus disorder prediction 121 136 - -
Lele07g2821 383 MobiDBLite consensus disorder prediction 341 355 - -
Lele07g2821 383 SMART sant 13 63 IPR001005 -
Lele07g2821 383 SMART sant 66 114 IPR001005 -
Lele07g2821 383 CDD SANT 16 61 IPR001005 -
Lele07g2821 383 MobiDBLite consensus disorder prediction 121 144 - -
Lele07g2821 383 Gene3D - 11 67 - -
Lele07g2821 383 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Lele07g2821 383 CDD SANT 69 112 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g2821 Lele-ChrLele07 33556865 33560038 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g2821 1 383 MYB Transcription Factor Family AT3G01140 54.145 1.00e-116 341
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele07g2821 Myb_DNA-binding 4.2e-15 CL0123