Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g2813 ATGGCAATAGAGAGTAAGATTTTTGGAATGAAATCACCTTCTAATTTTGGTCGATTCCCCTCCACGACCCTCGCCAATTTGAGAATGGATGGTTCAACTGGCCGTGCCAGCGGTGCAGATGTGTTTTTACCAAATTATAAGTTGGGGAAAACACTTGGCATTGGATCCTTCGGCAAGGTGAAAATTGCAGAGCATATATTGACTGGCCATAAAGTTGCCATTAAGATCCTTAATCAACGCAAGATAAAGAACATGGAAATGGAAGAAAAAGTGAGAAGAGAAATCAAAATTTTAAGATTGTTCATGCACCCTCACATAATACGACTTTACGAGGTCATAGAAACCCCAACAGACATATATCTTGTTATGGAGTATGTAAAATCGGGCGAACTCTTTGATTACATTGTGGAAAAGGGTAGGCTGCAAGAAGATGAAGCCCGCAATTTTTTCCAGCAGATAATCTCTGGTGTGGAGTACTGCCACAGAAATATGGTGGCTCATAGAGACCTTAAGCCAGAGAATTTGCTTTTGGACTCCAAATGCAATGTCAAAATTGCTGATTTTGGTTTGAGCAACATCATGCGTGATGGCCACTTTCTTAAGACAAGTTGTGGAAGCCCAAACTATGCTGCTCCAGAGGTTATATCTGGAAAATTGTATGCTGGACCTGAAGTAGATGTCTGGAGCTGTGGTGTAATTTTATATGCTCTTCTCTGTGGTACCCTTCCTTTTGACGATGAAAACATTCCAAACCTTTTTAAGAAAATAAAGGGTGGGATTTATACTCTTCCTAGTCATCTATCACCTGGTGCTAGAGATTTGATACCCAGGATGCTTGTGGTTGATCCTATGAAGAGAATGACCATACCTGAGATTCGTCAACACCCATGGTTTCAAGCTCACCTCCCTCGTTATTTAGCTGTGCCCCCACCAGATACAATGCAACAAGCAAAAAAGATTGATGAGGAACTTCTTCAGGAAGTTGTTAACATGGGATTTGATAGGAATCAACTGGTTGAATCTCTCCAGAACCGGATACAAAATGAGGGTACTGTAGCATACTATTTGTTATTGGACAATCGGTTCCGTGTTTCCAGTGGCTATCTTGGAGCTGAATTCCAAGAGACAATGGATTCTGGTTTTAACCGTATTCATCCTAGTGGAGTTACTGCCCCAGTTGTTGGTCACCGGCTTCCAGGGTTTATGGATTATCCAGGATCAGCATTAAGATCCCAGTTCCCTGTTGAGAGAAAATGGGCCCTTGGGCTTCAGTCTCCTGCTCATCCTCGCGAAATAATGACTGAGGTCCTCAAAGCTCTGCAAGAACTAAATGTGTGCTGGAAAAAGATTGGACCTTACAACATGAAGTGCAGATGGGTTGCTGGCAATCCTGGTCATGACGGAATGGTAGACAGTACTTATGGTAGTCATTACTACAGAGATGATGCCACCATCATTGAGAACGATTCTGTTTCTAAGCCAAATGTGGTCAAGTTTGAACTTCAGCTTTACAAAACTTGGGAGGAGAAATATCTGCTCGATCTTCAACGGGTCCTGGGCCCACAGTTTCTTTTTTTGGATCTTTGTGCCGCTTTCCTGGCACAGCTTCGTGTGCTCTAA 1620 0.4259 MAIESKIFGMKSPSNFGRFPSTTLANLRMDGSTGRASGADVFLPNYKLGKTLGIGSFGKVKIAEHILTGHKVAIKILNQRKIKNMEMEEKVRREIKILRLFMHPHIIRLYEVIETPTDIYLVMEYVKSGELFDYIVEKGRLQEDEARNFFQQIISGVEYCHRNMVAHRDLKPENLLLDSKCNVKIADFGLSNIMRDGHFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYALLCGTLPFDDENIPNLFKKIKGGIYTLPSHLSPGARDLIPRMLVVDPMKRMTIPEIRQHPWFQAHLPRYLAVPPPDTMQQAKKIDEELLQEVVNMGFDRNQLVESLQNRIQNEGTVAYYLLLDNRFRVSSGYLGAEFQETMDSGFNRIHPSGVTAPVVGHRLPGFMDYPGSALRSQFPVERKWALGLQSPAHPREIMTEVLKALQELNVCWKKIGPYNMKCRWVAGNPGHDGMVDSTYGSHYYRDDATIIENDSVSKPNVVKFELQLYKTWEEKYLLDLQRVLGPQFLFLDLCAAFLAQLRVL 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g2813 539 SMART serkin_6 46 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele07g2813 539 FunFam Non-specific serine/threonine protein kinase 35 125 - -
Lele07g2813 539 ProSiteProfiles Protein kinase domain profile. 46 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele07g2813 539 CDD AMPKA_C 416 536 - -
Lele07g2813 539 SUPERFAMILY KA1-like 355 538 IPR028375 -
Lele07g2813 539 ProSitePatterns Protein kinases ATP-binding region signature. 52 75 IPR017441 GO:0005524
Lele07g2813 539 CDD STKc_AMPK_alpha 43 298 - -
Lele07g2813 539 CDD UBA_SnRK1_plant 320 360 - -
Lele07g2813 539 Pfam Kinase associated domain 1 496 538 IPR001772 -
Lele07g2813 539 ProSitePatterns Serine/Threonine protein kinases active-site signature. 165 177 IPR008271 GO:0004672|GO:0006468
Lele07g2813 539 ProSiteProfiles Kinase associated domain 1 (KA1) profile. 490 538 IPR001772 -
Lele07g2813 539 FunFam Non-specific serine/threonine protein kinase 37 376 - -
Lele07g2813 539 Gene3D Transferase(Phosphotransferase) domain 1 37 376 - -
Lele07g2813 539 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 319 359 IPR015940 -
Lele07g2813 539 FunFam Non-specific serine/threonine protein kinase 422 537 - -
Lele07g2813 539 Gene3D Kinase associated domain 1, KA1 422 537 - -
Lele07g2813 539 SUPERFAMILY UBA-like 308 357 IPR009060 GO:0005515
Lele07g2813 539 PANTHER SERINE/THREONINE KINASE 45 363 - -
Lele07g2813 539 Pfam Protein kinase domain 46 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele07g2813 539 SMART uba_6 321 358 IPR015940 -
Lele07g2813 539 SUPERFAMILY Protein kinase-like (PK-like) 42 317 IPR011009 -
Lele07g2813 539 Pfam UBA/TS-N domain 320 356 IPR015940 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g2813 Lele-ChrLele07 33501862 33508735 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g2813 46 298 CBL-interacting serine-threonine protein kinases AT4G24400 52.362 2.05e-92 287
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_AMPK Lele07g2813 Pkinase 8.9e-81 CL0016