Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g2810 ATGGCCACTAAAAATGGCCATTCCCTCGCGCCACCGCCGCCTTGTCCGGCCATCACCCTCCCGCCGCGACCTTCCATGGAGGCCTTCTTCACCAGTGGACCCGGTCTAAGCCCTGGCCCCATGACTCTCGTCTCCAGCTTCTTCTCCGACACCTACCCTGACTCCGATTGCCGCTCTTTCTCTCAGCTTCTCGCCGGAGCCATGGCTTCGCCTCTTGCTCCCGGCACCAGGCCTAGTTTCCTTCCGGACAATTCAGCCAGCAATTCCTCCACTTCTGAGGATGCAGCTAAGAAGAATTTGGGGTTCAAGCAGAGTAGACCAATGAATTTGGTTGTTGCTCGTTCCCCATTGTTTACAATCCCGCCTGGGCTTAGCCCTTCTGGTTTGCTTAATTCTCCGGGCTTCTTTTCGCCGCAGAGCCCCTTTGGGATGTCCCACCAACAGGCTTTAGCGCAGGTTACTGCTCAAGCTGTCCTAGCACAATCACAAATGCATGCTCAAGCCGATTTTCACCCATCAGCGGTAACAGCCCCTTCGGAACCATTGGCAGTGCAGCCATCCAGCACTCCTGGTGAAGGATTAGAGCTGCAAGTGGTACCATTGGTATCGGAACCTAAAGCTGCCCTAGTGGAAATATCAGAAATTTCTCATGCTGATAACAAATATCAAGCTTCTTCTATGGGTGTTGACAAACCAGCGGATGATGGCTATAACTGGCGTAAGTATGGGCAGAAGCAGGTTAAGGGGAGTTACTATCCTCGGAGCTACTACAAGTGTACGCATCTGAATTGCCCTGTAAAGAAAAAGATTGAGCGAGCCCATGATGGCCGTATAACTGAAATTATCTATAAAGGCCAGCATAACCATGAAAAGCCTCAGCCCAATAGGCGTGCTGCCAAAGATAATTGTGAATCAAATGAAAATAAAAGCATTCAAGTTATGTCTGAGTCAAATACAAAGGGTTGTGTTGGGAATCCGAATGTGTTAGGTGAAAGCATGCCTGACCATTCAATGCCTGAGAGTGACCAGACCTCGAATCAAGAGGCTCCGAGACAGTTATCTGGATCACATGGGAGTGAGGAAGCACTTGGTGCAAATATTACAGAAGATGGAGATGTTGGTGAACCAAATCCAAAAAAGAGGAGCACTGAGGATGGAGCTTCTGAAGCATCTTTGTCCCACAAGACTGTTACAGAACCTAAAATCATCTTGCAAACAAGAAGCGAAGTTGATCTGTTAGATGATGGCTACAGGTGGCGTAAGTATGGGCAGAAAGTAGTGAAGGGAAATCCTCATCCAAGGAGTTATTACAAATGCACTTTTGCAGGATGTAATGTGCGTAAGCATGTTGAGAGATCTTCAACAGACCCAAAAGCTGTCGTAACTACGTATGAGGGAAAACATAACCATGATGTGCCTGCTTCTAGACATTGCAGCCACACCACCTCAGCTACTACCAATTCAATGCCTTTAAGACAACATAGAGTGACTCCTGGGAACAATGAGAAAAGACCAGCTGTTTTACGCTTAAAAGAAGAGCAAAACGGAGTATAA 1554 0.4781 MATKNGHSLAPPPPCPAITLPPRPSMEAFFTSGPGLSPGPMTLVSSFFSDTYPDSDCRSFSQLLAGAMASPLAPGTRPSFLPDNSASNSSTSEDAAKKNLGFKQSRPMNLVVARSPLFTIPPGLSPSGLLNSPGFFSPQSPFGMSHQQALAQVTAQAVLAQSQMHAQADFHPSAVTAPSEPLAVQPSSTPGEGLELQVVPLVSEPKAALVEISEISHADNKYQASSMGVDKPADDGYNWRKYGQKQVKGSYYPRSYYKCTHLNCPVKKKIERAHDGRITEIIYKGQHNHEKPQPNRRAAKDNCESNENKSIQVMSESNTKGCVGNPNVLGESMPDHSMPESDQTSNQEAPRQLSGSHGSEEALGANITEDGDVGEPNPKKRSTEDGASEASLSHKTVTEPKIILQTRSEVDLLDDGYRWRKYGQKVVKGNPHPRSYYKCTFAGCNVRKHVERSSTDPKAVVTTYEGKHNHDVPASRHCSHTTSATTNSMPLRQHRVTPGNNEKRPAVLRLKEEQNGV 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g2810 517 MobiDBLite consensus disorder prediction 469 517 - -
Lele07g2810 517 FunFam WRKY transcription factor 57 399 473 - -
Lele07g2810 517 MobiDBLite consensus disorder prediction 373 388 - -
Lele07g2810 517 SMART WRKY_cls 233 291 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele07g2810 517 SMART WRKY_cls 413 472 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele07g2810 517 MobiDBLite consensus disorder prediction 75 95 - -
Lele07g2810 517 Gene3D WRKY domain 398 474 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele07g2810 517 Gene3D WRKY domain 219 293 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele07g2810 517 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 132 495 IPR044810 GO:0003700
Lele07g2810 517 MobiDBLite consensus disorder prediction 305 325 - -
Lele07g2810 517 MobiDBLite consensus disorder prediction 283 304 - -
Lele07g2810 517 SUPERFAMILY WRKY DNA-binding domain 231 292 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele07g2810 517 MobiDBLite consensus disorder prediction 337 354 - -
Lele07g2810 517 MobiDBLite consensus disorder prediction 80 95 - -
Lele07g2810 517 SUPERFAMILY WRKY DNA-binding domain 405 473 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele07g2810 517 MobiDBLite consensus disorder prediction 1 34 - -
Lele07g2810 517 Pfam WRKY DNA -binding domain 414 470 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele07g2810 517 Pfam WRKY DNA -binding domain 234 290 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele07g2810 517 MobiDBLite consensus disorder prediction 476 495 - -
Lele07g2810 517 FunFam WRKY transcription factor 221 293 - -
Lele07g2810 517 ProSiteProfiles WRKY domain profile. 408 473 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele07g2810 517 MobiDBLite consensus disorder prediction 283 394 - -
Lele07g2810 517 ProSiteProfiles WRKY domain profile. 234 292 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g2810 Lele-ChrLele07 33487178 33494638 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g2810 16 514 WRKY Transcription Factor Family AT2G03340 50.962 1.58e-137 405
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele07g2810 WRKY 6.9e-26 CL0274