Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g2760 ATGAGCACCAACACATCGGAGGCGCACGGCTCTAAGCCATCGTTTAGCGGATATGCCCATAGCTCGATCGGACTATCCACCGGAATTCTCCTTCTCTTCGCATTCATCACCGTAATCTTGTACCTCTGCGCCCGCAGAATCGCCATGAACCCGACGCAACTGTCACGAGTTCGCCACGCAAACTTTATCTTACACACCATTAGCATCGGAGATGCTCCGGGGACGAACAGTGGTGCACAGTTTGGTGTGGATGAAGAGAAGCTGAAGAGTTATCCGGTGCTGTTATACTCGGAAGCGAAGCATGGTCGGAAAGGCGGTGCCAGTGGTGGTGATTCTGCGGAGGCTACTTGTTCGATATGCTTGGGGGATTTCAGTGACAGTGAGTGGTTGAGGGAGTTGCCGGATTGTCATCACTTTTTTCACCAGAAGTGTATTGATATGTGGCTGAGGATGAACTCTTCGTGTCCTTTGTGCCGGATGTATCCGCTTCCGACGTCGGTTTCAACTCCGCTTGCTGAAGTCGCTCCCTTTGCAAGATCAGGGGCTTGA 549 0.5209 MSTNTSEAHGSKPSFSGYAHSSIGLSTGILLLFAFITVILYLCARRIAMNPTQLSRVRHANFILHTISIGDAPGTNSGAQFGVDEEKLKSYPVLLYSEAKHGRKGGASGGDSAEATCSICLGDFSDSEWLRELPDCHHFFHQKCIDMWLRMNSSCPLCRMYPLPTSVSTPLAEVAPFARSGA 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g2760 182 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 74 163 IPR013083 -
Lele07g2760 182 SUPERFAMILY RING/U-box 116 163 - -
Lele07g2760 182 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 4 173 IPR045899 -
Lele07g2760 182 ProSiteProfiles Zinc finger RING-type profile. 117 159 IPR001841 -
Lele07g2760 182 CDD RING-H2_PA-TM-RING 116 159 - -
Lele07g2760 182 Pfam Ring finger domain 116 159 IPR001841 -
Lele07g2760 182 SMART ring_2 117 158 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g2760 Lele-ChrLele07 33077434 33077982 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g2760 82 182 C3H Transcription Factor Family AT2G35910 54.455 8.39e-36 122