Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g2759 ATGAGCAGCAACAGTACGTCGGAGCCTGGTGGTTCTTCGTCAGACTTAGGCGGATATGCCTATTACTCCTTCGGATTATCCGTTGGAGTTCTTCTTCTCTTTGCATTCCTCACTTGTCTCTTATACTACTGCACCCGCAGAAACGCCTTCAACACATCACAAGATTTCTCCCCAAGCTTTCGCTTACACCCCGTTAGTATCGCCGGAGATTCCGACTGTCTGCCAGCAGGTGTCGACGAAGCGACCCTGAAGAGTTATCCGGTGCTGTTGTACTCCGAAGCGAAGCGCGATCGGAAGGGTGATTCTGCGGCTACTTGTTCGATATGCTTGGGGGATTTCAGTGACAGTGAGTGGTTGAGGGAGTTGCCGGATTGTGGTCACTTGTTTCACCGGAAGTGTATCGATATGTGGCTGAGGATGAACTCTTCGTGTCCATTGTGTCGGACCTCACCGCTTCCAACGCCGGTTTCCACTCCCCTGGCCGAAGTTGCTCCATTGGCAAGATATTGA 510 0.5176 MSSNSTSEPGGSSSDLGGYAYYSFGLSVGVLLLFAFLTCLLYYCTRRNAFNTSQDFSPSFRLHPVSIAGDSDCLPAGVDEATLKSYPVLLYSEAKRDRKGDSAATCSICLGDFSDSEWLRELPDCGHLFHRKCIDMWLRMNSSCPLCRTSPLPTPVSTPLAEVAPLARY 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g2759 169 SMART ring_2 106 147 IPR001841 -
Lele07g2759 169 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 11 162 IPR045899 -
Lele07g2759 169 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 70 152 IPR013083 -
Lele07g2759 169 CDD RING-H2_PA-TM-RING 105 148 - -
Lele07g2759 169 FunFam E3 ubiquitin-protein ligase ATL6 68 153 - -
Lele07g2759 169 ProSiteProfiles Zinc finger RING-type profile. 106 148 IPR001841 -
Lele07g2759 169 SUPERFAMILY RING/U-box 105 153 - -
Lele07g2759 169 Pfam Ring finger domain 105 148 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g2759 Lele-ChrLele07 33067138 33067647 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g2759 13 167 C3H Transcription Factor Family AT2G35910 53.205 4.16e-44 143