Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g2746 ATGATGAACTGGAGTGGGGAGGTGGAGAAGCTGTTTGAGTCTGCTCTGCAGGTGTTCCCGGAAGAGTATCCCAACCGGTGGGAGAGGATCGCGGAGGTGATCCCCGGCGCCAACAAGGAGATGGTTTGCCAACGATATCACGAGCTGCAACTGGAGGTCGCCGAGATTGAATCGATTCGGGTTCCGCCGTCACCAGATCACCCGGCGACAGACTCTTGGCCCTCCTCCTCCTCCTCCTCCTCCTTATCGTGCGGCAATCATGTTCCTGTACTTAACCACCGGCACCAGCAGCGACCACCCAAGTATAGCGGTCCCACAAGAAACAGAGGAACCTCTACTACCACTTCCACTTGGTCCTTGAGAGAACACATACTGTTCCTGGTGGGAGTGGAGATATATGGTAAGGGAAAATGGACGAGGATTTCTCACGAAGTTCTGAAGACAAAAACTGCAAGTCAGATTGGAAGCCATGCTCAGAAATTTTATCTTCGCCAAAGTGAAAGAGCGACAAAAGATAAGACAAGACCAAGTATCCATGATTGGACCTTAGCTGATGTCAGCCCTCAATATCTGGATCACATTCTTTCTTCACTACATCATCATCAAGTTCATTCGAGTGATGATCTTCATCAAGCTCATTATCATGATCATCTTCCAGTGATGAATCCGCAGCCACCATCAGCAGACCTCATCAGCTCTCAATATTTGAATCACATTGTTTCTTCAGTGCCCTCACAACATCATCATCAATCTAACTCGTCCATGCATCATCTTCATCAAGTTCCTTCAAGTCATCATCAAATTCATCACCGTCATGATGTTCCAGCGATGAATCATCAGTCATCTGCAACAACGAATCAAGCAGGCTACTCAGTGCAGATTCCTCCATCAGGACTTCAATTGCAGAAGCCATGGCCATTAATGCATCATCAACAATCATATCAGCCAGCTAACTCATCATCACAAGTTCATTATCAATCACCGGTACTGAATCAATGGAATCAATCGGATCAGTCACAAGTGATGATATATGGCAAGGGAAAATGGAACAAAATTGCTAGCTCAAAGCAAGAATTGCAAGTCAGAGGAGTGCCCCGATCGTTGGGAGAGGATAGCCGAGGAAGTCCCAGGTGCCACCAAGGAAATGGTTCTGCAACGATATCAAGAGCTCGTAGACGACGTGGCCCGATCGAAGAGGGTAACGTGCCGATTCCGTCATACCCTGATCACTGCAAAATGAACGAAGAACACAAAGTTGATGATGAACAAGGAACAAAGAAGAGTGGAGAAAGAAGAGAGCTAGCTGTAGGGGCAAAGAAGAAGATGAAGAGAAAGGGGCCACATCAACCTTGA 1353 0.4715 MMNWSGEVEKLFESALQVFPEEYPNRWERIAEVIPGANKEMVCQRYHELQLEVAEIESIRVPPSPDHPATDSWPSSSSSSSLSCGNHVPVLNHRHQQRPPKYSGPTRNRGTSTTTSTWSLREHILFLVGVEIYGKGKWTRISHEVLKTKTASQIGSHAQKFYLRQSERATKDKTRPSIHDWTLADVSPQYLDHILSSLHHHQVHSSDDLHQAHYHDHLPVMNPQPPSADLISSQYLNHIVSSVPSQHHHQSNSSMHHLHQVPSSHHQIHHRHDVPAMNHQSSATTNQAGYSVQIPPSGLQLQKPWPLMHHQQSYQPANSSSQVHYQSPVLNQWNQSDQSQVMIYGKGKWNKIASSKQELQVRGVPRSLGEDSRGSPRCHQGNGSATISRARRRRGPIEEGNVPIPSYPDHCKMNEEHKVDDEQGTKKSGERRELAVGAKKKMKRKGPHQP 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g2746 450 SMART sant 114 164 IPR001005 -
Lele07g2746 450 SMART sant 1 52 IPR001005 -
Lele07g2746 450 SUPERFAMILY Homeodomain-like 3 50 IPR009057 -
Lele07g2746 450 Gene3D - 2 62 - -
Lele07g2746 450 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 117 166 IPR017930 -
Lele07g2746 450 MobiDBLite consensus disorder prediction 61 115 - -
Lele07g2746 450 SUPERFAMILY Homeodomain-like 114 166 IPR009057 -
Lele07g2746 450 MobiDBLite consensus disorder prediction 99 115 - -
Lele07g2746 450 MobiDBLite consensus disorder prediction 70 87 - -
Lele07g2746 450 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 117 165 IPR006447 GO:0003677
Lele07g2746 450 MobiDBLite consensus disorder prediction 358 450 - -
Lele07g2746 450 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 3 287 IPR043363 -
Lele07g2746 450 CDD SANT 3 49 IPR001005 -
Lele07g2746 450 Pfam Myb-like DNA-binding domain 116 160 IPR001005 -
Lele07g2746 450 CDD SANT 118 161 IPR001005 -
Lele07g2746 450 Gene3D - 116 167 - -
Lele07g2746 450 MobiDBLite consensus disorder prediction 410 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g2746 Lele-ChrLele07 32924060 32928707 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele07g2746 Myb_DNA-binding 1.5e-07 CL0123