Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g2742 ATGATGAACTGGAGTGGGGAGGTGGAGAAGCTGTTTGAGACTGCTCTGCAGGTGTTTCCGGAAGACTACCCCAACCGGTGGGAGAGGATCGCGGAGGTGATCCCCGGCGCCACCAAGGAGATGGTTTGCCAACGATATCACGAGCTGCAACTGGAGGTCGCCGAGATTGAATCGATTCGGGTTCCGCCGTCACCAGATCACCGGGCGACAGACTCTTGGCCCTCCTCCTCCTCCTTATCGTGCGGCAATCATGTTCCTGTACTTAACCAACGATATGAAGATAAGCTGCTTTACAACGCTGCGCAGATTGAATTGGGTCGGGTGCCCCCACCTGATTACCCGGACTCTTGGCAGTCATGCACATCCTCCCGCTACACCGTTAATAATGTTGCTGTATTTAACTCCGGCCACCACCAGCGGCCACCCCAGTATAGCAGTCCCATAAGAAAGAGCAGCCCCCATTGGTCCCTGAGAGAACACATACTATTCCTGTTGGGAGTGGAGATATATGGCAAGGGAAAATGGAGCATGATTTCTAAACACGTAGTGATGACAAGAAGCGCAAATCAGGTGGCAAGCCATGCTCAGAAGTTTTATCTTCGCCAAAGTCACAGAGACACAAATGTTAAGAGAGGAAGAGGCGGAAGCATCCATGATATCGCTTTAGCTGACCTCAGCACTGAATCTTTGAATCAGATTCTTTCTTCAATCCACTCACTGCATCATCATCAATCTAATTCACCGTCATCATCCATTCATCAAGTTCCTTCAAGTGATCTTCTTAAATCTCATCACCATCAAGTTCATCATCATGATCTTCCAATGAATCAGTCATCTTCAGCTCTTCACTTGCAGAAGCCATGGCCAATCTCACCACATCATCATCAATCTAACTCATCATCCATCCATTATCATCAGCATCAAGTTCCTTCAAGTGATCTTCAATCTCATCATGATCGAGTTCTTTATGATGATGTTCCAGTAAATCAGCTGTCATCTGGAATAATGAATCAAGTAGGCTCACAGATTGCTTCTGGACTTCAATTGCAGAAGCCCTGCCCAACAATCTCACAAGTTCCTTATGAATCAATGGGATCAATCTGA 1104 0.471 MMNWSGEVEKLFETALQVFPEDYPNRWERIAEVIPGATKEMVCQRYHELQLEVAEIESIRVPPSPDHRATDSWPSSSSLSCGNHVPVLNQRYEDKLLYNAAQIELGRVPPPDYPDSWQSCTSSRYTVNNVAVFNSGHHQRPPQYSSPIRKSSPHWSLREHILFLLGVEIYGKGKWSMISKHVVMTRSANQVASHAQKFYLRQSHRDTNVKRGRGGSIHDIALADLSTESLNQILSSIHSLHHHQSNSPSSSIHQVPSSDLLKSHHHQVHHHDLPMNQSSSALHLQKPWPISPHHHQSNSSSIHYHQHQVPSSDLQSHHDRVLYDDVPVNQLSSGIMNQVGSQIASGLQLQKPCPTISQVPYESMGSI 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g2742 367 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 151 202 IPR006447 GO:0003677
Lele07g2742 367 MobiDBLite consensus disorder prediction 273 311 - -
Lele07g2742 367 SMART sant 1 52 IPR001005 -
Lele07g2742 367 SMART sant 151 201 IPR001005 -
Lele07g2742 367 MobiDBLite consensus disorder prediction 239 316 - -
Lele07g2742 367 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 155 203 IPR017930 -
Lele07g2742 367 Pfam Myb-like DNA-binding domain 154 197 IPR001005 -
Lele07g2742 367 CDD SANT 3 49 IPR001005 -
Lele07g2742 367 Gene3D - 153 204 - -
Lele07g2742 367 CDD SANT 155 198 IPR001005 -
Lele07g2742 367 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 3 289 IPR043363 -
Lele07g2742 367 MobiDBLite consensus disorder prediction 239 258 - -
Lele07g2742 367 SUPERFAMILY Homeodomain-like 3 50 IPR009057 -
Lele07g2742 367 Gene3D - 2 62 - -
Lele07g2742 367 SUPERFAMILY Homeodomain-like 148 203 IPR009057 -
Lele07g2742 367 ProSiteProfiles Myb-like domain profile. 155 199 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g2742 Lele-ChrLele07 32899590 32901083 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele07g2742 Myb_DNA-binding 8.2e-09 CL0123