Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g2736 ATGGACTTTGAAGCGATCCTTCTCCCAAAATGGGCATCACAGCCTTGCATCATGGGAATTGACGAAGCTGGCCGAGGACCCGTTTTAGGACCCATGGTGTATGGATGCTTGTACTGTGCTCGCTCCTATCAGAAGACCCTCGCAACTTTGAGTTTTGCTGATTCGAAGACACTAAAAGAAGAGAAGAGGGAAGAATTATTTGATAGTCTAAAGGGAAATGAATCAATTGGATGGGCAGTTGATGTCTTAGACCCAAGGGAACTCTCAGCTAAAATGTTGAAGAGGAACAAGATAAATCTGAATGAGATATCGCATCAATCTGCAATGGGTTTGATTGATAGGGTACTGAAGATGGGAGTTCTTCTGACTGAGGTCTATATAGATACAGTTGGAGATCCAGGAAAATATGAAATTATGCTATCAAAAAATTTCCCTTCTATCAAATTTGTGGTTGCAAAGAAGGCTGATAGTCTCTATCCTGTTGTGAGTGGTGCTAGCATAGTTGCAAAGGTCACTAGAGACCGAGCTTTGCGGGAATGGGTGCTTGATGAGACTGCTGAAAACATGCACAGGAACTTTGGGTCTGGGTATCCTGGAGACCCCAAAACCAAATCCTGGTTAGAACAACACAAACATTCTGTCTTTGGATTCCCAACATTGGTCAGATTCAGCTGGGGAACCTGCACTACATATTTCAAAGATGCTGTGGAAGTCTTATGGGAATCTGATAAAATGGATGAAGAAGGGGAAGGTGGAAGCAACTGTGGGAAGCGGCAATTGAAATTAAGAAACGTAGGTTTCAGCACATCAAAGAGAAAAAGTGAAGAAATAGAATCAAGTGGCAAAGGTCGCAGCAGGTTTTTCCAGACTCGGAAGCTTGAAATTGTTACTGATTTCTGA 900 0.4267 MDFEAILLPKWASQPCIMGIDEAGRGPVLGPMVYGCLYCARSYQKTLATLSFADSKTLKEEKREELFDSLKGNESIGWAVDVLDPRELSAKMLKRNKINLNEISHQSAMGLIDRVLKMGVLLTEVYIDTVGDPGKYEIMLSKNFPSIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWVLDETAENMHRNFGSGYPGDPKTKSWLEQHKHSVFGFPTLVRFSWGTCTTYFKDAVEVLWESDKMDEEGEGGSNCGKRQLKLRNVGFSTSKRKSEEIESSGKGRSRFFQTRKLEIVTDF 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g2736 299 Gene3D - 3 187 IPR036397 GO:0003676
Lele07g2736 299 CDD RNase_HII_eukaryota_like 18 234 - -
Lele07g2736 299 ProSiteProfiles Ribonuclease (RNase) H type-2 domain profile. 15 237 IPR024567 GO:0004523
Lele07g2736 299 TIGRFAM TIGR00729: ribonuclease HII 17 230 IPR004649 GO:0004523|GO:0016070
Lele07g2736 299 Pfam Ribonuclease HII 18 228 IPR024567 GO:0004523
Lele07g2736 299 PANTHER RIBONUCLEASE H2 SUBUNIT A 8 286 IPR001352 GO:0003723|GO:0004523
Lele07g2736 299 FunFam Ribonuclease 189 236 - -
Lele07g2736 299 Gene3D Ribonuclease hii. Domain 2 188 235 IPR023160 GO:0004523
Lele07g2736 299 FunFam Ribonuclease 3 187 - -
Lele07g2736 299 SUPERFAMILY Ribonuclease H-like 16 233 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g2736 Lele-ChrLele07 32857484 32860901 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g2736 7 299 Core DNA Replication Machinery Family AT2G25100 67.918 4.77e-148 415
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g2715 05 43025523 43031534 Lele07g2736 07 32857484 32860901 hybridization
Lele06g2702 06 34826270 34829436 Lele07g2736 07 32857484 32860901 hybridization