Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g2734 ATGTCACTTAGAGGTTGCTATACTCTGATCAGTGGTTACAAGTGTGACCTTGATTTGTGCAGCTTTTATGGAATTTTGCGGAAGGGATCAACTTTGCCTCTGGAGGAGCTGGCATTCTCAATGAAACTGGCCTTTATTTCGTACGCTCTAAACTCAAATCAATCACCTTCAAATACATTAACTTGGTCATTAGAACTTGCCCCTCTAATTCAAAAGAGAACAACAAAGGATAATGATGGTGACAGAAATGTGCTTGCTTATTCATGTTTTTTGGCTGGCTGCACAGCAGCACTTGTTTTAGCACTTACTCTGATCATCCATGCCTACAAAATTCTGAATCACCCAGGGAGTACTAAGTGTACATGGAAACCTTGTTTCCTCTTTACAGGGTGTGAGTTGAGTTACCTTGATGCTCTCCTCCTATTTTTTGCCATTGCTAGATTGGCGCTAGCTGGTGTACTTGCGAACCTCGACATGGCCTCTGTATATCCAGTACGTTCAGAGCTGCGGTCCTATTTCTCTAAAAATTCTGAGAAGTTGATCAAACAAAAGCGGCCTTACATCAGGATGAATGCTCTCCATCGGAAGGCATGGTCGAAGAGCCGAAGAAGAGAGCAGGGATGGGGACTTTACCCTGTTTCTACAGTCTATATTGCATTTCATAAGTACAAGATGTCAGTTGTGAACGTGTCCAATGTGAGACTTCCTTCCGCTTCCTTGTCAAGAACCACACCCACAAGGAGATCTTGTGCTCTATTTAAGAGTGGGTCATCCTTAGGCTCTGTGAAGAATGCTTCTAAGCTATTTGGGTTGAAATCTGAATCCTTCAGAGTTTCTGCCATGGCTGTGTATAAAGTGAAACTGATTGGACCTGATGGCACTGAGGATGAGTTTGAAGCTCCTGATGACTCTTACATTCTGGACTCAGCTGAAAATGCAGGGGTGGAGCTACCTTACTCGTGCAGAGCCGGCGCTTGCTCTACTTGTGCCGGCCAAGTGGTTTCAGGATCCGTGGACCAATCAGATCAATCCTTTCTGGATGAGACGCAGATGGGGCAGGGTTTCATTCTGACCTGTGTTTCATATCCAACCTCTGATTGTGTGATTCACACCCACAAGGAGAAGTTGGATGATGTGAAAAGAGAGGCATTAAGTATGTTCCCGCCCTTTCTTTCTTCATTCATCACAGAACACCGTCAAGGCGGCCACGAGAAAGAACGCAATAGGGTTCCCGGTTTTTGCATCAGTCACAGGTTGGGTTTAACAAATGTTTCTGTGATTTCAATTTGCTTTACCATGGACACGTCAAACCCTGCAGCATTTGTAAATGCAGAGTTGCTTCCCAATTTCATAGGCAAGAAAGTTCGAGCCGTGGTTCAAGTTCATCAATCTGATGGTAGTGTTGCCATTGGAAAATCCACAGATGGAAGTCAGCTAACTGTGAAGGGGTTGCCACAGGTTCCTGCTATGAATTATGTTGAGGTGATTGGTATTGCAGAGAGCAACCAATTGATTAATGCTGAGATATGGACCGACTTTGGCAACACATTCGACACTCAATCGTATAATAAATTATGCCAACTAGCAAATGGGGAATTCAGAAGTCTGTTTCTTTAG 1617 0.4403 MSLRGCYTLISGYKCDLDLCSFYGILRKGSTLPLEELAFSMKLAFISYALNSNQSPSNTLTWSLELAPLIQKRTTKDNDGDRNVLAYSCFLAGCTAALVLALTLIIHAYKILNHPGSTKCTWKPCFLFTGCELSYLDALLLFFAIARLALAGVLANLDMASVYPVRSELRSYFSKNSEKLIKQKRPYIRMNALHRKAWSKSRRREQGWGLYPVSTVYIAFHKYKMSVVNVSNVRLPSASLSRTTPTRRSCALFKSGSSLGSVKNASKLFGLKSESFRVSAMAVYKVKLIGPDGTEDEFEAPDDSYILDSAENAGVELPYSCRAGACSTCAGQVVSGSVDQSDQSFLDETQMGQGFILTCVSYPTSDCVIHTHKEKLDDVKREALSMFPPFLSSFITEHRQGGHEKERNRVPGFCISHRLGLTNVSVISICFTMDTSNPAAFVNAELLPNFIGKKVRAVVQVHQSDGSVAIGKSTDGSQLTVKGLPQVPAMNYVEVIGIAESNQLINAEIWTDFGNTFDTQSYNKLCQLANGEFRSLFL 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g2734 538 CDD RPA3 438 537 - -
Lele07g2734 538 Pfam 2Fe-2S iron-sulfur cluster binding domain 291 364 IPR001041 GO:0051536
Lele07g2734 538 SUPERFAMILY Nucleic acid-binding proteins 437 537 IPR012340 -
Lele07g2734 538 TIGRFAM fdx_plant: ferredoxin [2Fe-2S] 282 375 IPR010241 GO:0009055|GO:0022900|GO:0051537
Lele07g2734 538 FunFam Ferredoxin 282 377 - -
Lele07g2734 538 Pfam Replication factor A protein 3 433 531 IPR013970 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Lele07g2734 538 ProSiteProfiles 2Fe-2S ferredoxin-type iron-sulfur binding domain profile. 284 375 IPR001041 GO:0051536
Lele07g2734 538 ProSitePatterns 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 321 329 IPR006058 GO:0051537
Lele07g2734 538 SUPERFAMILY 2Fe-2S ferredoxin-like 269 375 IPR036010 GO:0051536
Lele07g2734 538 CDD fer2 286 370 IPR001041 GO:0051536
Lele07g2734 538 Gene3D - 281 383 IPR012675 -
Lele07g2734 538 PANTHER FERREDOXIN 241 375 - -
Lele07g2734 538 Gene3D - 433 538 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g2734 Lele-ChrLele07 32841899 32852073 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g2734 433 538 Core DNA Replication Machinery Family AT4G18590 63.208 2.43e-42 145
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g2700 06 34814856 34819282 Lele07g2734 07 32841899 32852073 hybridization