Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g2705 ATGATATCTTCTGGGGTTAACTTGGTGATGACTGTGATTGGATTTGCGGTGAGCACTATGTTCATCGTTTTCGTTTGCACTAGACTCATCTGTGCTCGAATTCACTTGACTGCTTCTCGCCGATCCCTCCTTGTTGCTTCCAGATCCAATCTCAGTCTGCTGGAACGGGGATCTCATGGTCTTGAACCCGTAGCAGTAGCGAACTTCCCGACGAAGAAGTACAGTGATGGATGCTTTGCTGCTGCAGAAAATTCTCGATGCACAGTTTGTCTTTCAGAATACCAAGGTGAGGATGTACTGCGCATCCTCCCCTATTGTGGACACTTCTTCCATGCAACCTGCATAGACATATGGCTGCAGCAACATTCCACATGCCCTGTATGTCGAATCTCATTACGTAAATCATCCGAGAGAAAACACATAATGCGACCGTTGTTCAGTGCTGCTGTTCAATCTAATTATGGCATGGAATCTATTGAGGCTCATCCTTATCACTGTATGATGGCTAATAATGAGTTATCACCGAGAAACCCTGACGACATACATGGCGCTAACCCGATTCGAGAGGATCGTTATGCAGCAGAAGGTGGTGGAACGGTTGCTATAGAGAATGTGGCCAATTTAAGTGATGGTGATGATCAGTCCATTAAAGATGCAGGGAAGAAGCATACTGAGAGCCCATCAATTCCCTTAAGCTAA 699 0.4564 MISSGVNLVMTVIGFAVSTMFIVFVCTRLICARIHLTASRRSLLVASRSNLSLLERGSHGLEPVAVANFPTKKYSDGCFAAAENSRCTVCLSEYQGEDVLRILPYCGHFFHATCIDIWLQQHSTCPVCRISLRKSSERKHIMRPLFSAAVQSNYGMESIEAHPYHCMMANNELSPRNPDDIHGANPIREDRYAAEGGGTVAIENVANLSDGDDQSIKDAGKKHTESPSIPLS 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g2705 232 FunFam E3 ubiquitin-protein ligase ATL6 49 135 - -
Lele07g2705 232 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 51 135 IPR013083 -
Lele07g2705 232 Pfam Ring finger domain 86 129 IPR001841 -
Lele07g2705 232 ProSiteProfiles Zinc finger RING-type profile. 87 129 IPR001841 -
Lele07g2705 232 SMART ring_2 87 128 IPR001841 -
Lele07g2705 232 MobiDBLite consensus disorder prediction 206 232 - -
Lele07g2705 232 SUPERFAMILY RING/U-box 81 134 - -
Lele07g2705 232 PANTHER OS11G0150450 PROTEIN 1 181 - -
Lele07g2705 232 CDD RING-H2_PA-TM-RING 87 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g2705 Lele-ChrLele07 32565911 32567328 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g2705 6 177 Rapid Response to Elicitors AT2G35000 30.366 2.10e-19 84.0