Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g2701 ATGAATGGTTCTTGTGGTTCTTGGGTACCTGTCACTCCTGAGAAGCCAGTTCAAATAAGACCCGATACAATATCAGCAGGCTGGCGGGAAAACCGAATGGTAGGAGGGAATTTGAAAATGTTAACTGTTCCTGGAAGTGGCTACATGAAAGAGATGCTGCAGTGTAATGGGCTACAAAATGTCCATCTAGTAGGACAAACTGAAGAGTGCAATTATTTTGAGGGAGGTTCTTCTGCGAGAGCCAGTGTCATCAATCGCATTGATGTGGACTTTGACAGCAATAGATTGAATGCTTTGGAACTTCTATTCATGAAAAATGCAAGTAACAATCGTTATGTTGACAGGAACTTAAGTGAAAGTATAAGCATGGCAGTAAGAACACCAGTGCTACCAAAATTTCATCCTCACACAAGAAGTAATGGGAGAGATTTCAATGCAGATGGTTTCACTGTCAACAAAAACAGGAACTATTCAGATTCAGATTCAGTGTACACAGATGCAAATCTTTCGGTCCCAAATAGGAATTCTGAATGTGACAGCAGCAACTTATATGATTTTCTGAACAACACTCACTGCTCATTCTCAAGCCTGCTGAATAGTAGCCTATCTGAGCCGGAGATACCCAATGGTGGTTTTTACGTACATTGTAGACCCAACTATGATGAAAACTCTGCAGATGTCACAGAAGCTGATGATGTCTTTAGTTTCACCAACTCCTTCCAATCAGTAACGGGAACAATGGATCAGTTCAATAAGTTTACAGACAACCAATTTATGAAGTATGTAACAGCTGAAAGTCAAATTCAGGTGACTGACAGGCTAGACAACTTGGTTGTATCCACAGAAAATGATCACCATGAATATTGCGACGGACTTCTACAGCATATCATCGATACATCTACAGCAATTTCTAAATCACACGACCAAAATGAGGGTTCTGAAAATAATCATTGTAGTGGAAATGGCCTGGATATTGATCTGAATAAGACACCTGAGCAGAAACCACCTAAACGAAGAAAACACAGGCCGAAGGTAGTTGTAGAAAACAAGCCCAAAAGAACTCCAAATCCTGAAACTAGAAAAAAGAGAGGATCTACGGAGAATCCACGCCAAAAGAGGAAGTATGTACGAAAGAATGTCCCAAAAGAAGGAGCAACACCGCAAGCCGATGTTTTAGAGACTTTAGGTTCTGCAACTGCAACTAGAAAATCTTGCAGGAAAGCTCTAAATTTTGATTTAGAAGAGAATAGATGCCAAGACCAGACTGCAACTAGAAAATCTTGCAGGAAAGCTCTAAATTTTGATTTAGAAGAGAATAGATGTAAAGACCAGAACAAATCAGTCGATCAGCAGGAGATCCAGAGCAGAAATGGGTTGCTCACAGAGTTGCTCAGTGCAGCGAGCGTTTGCTACAATACAAACTCAGCTTTGATTCTCGGCAAGCAGGATGGACTTACAGTTGAAAACCAACAACCCAGAAGCACAGATGATGGTGCCTGTTTATTGCATCAAAGGCTAAGTGACAGATACCTGCCGAAAGAGCAAGCAAATGGACCCTTGTCAGCAAATACAGAAATGCAGATTAGAAATTTCTTAGAGACTGAGAAAGGTCCAGCTCAAGACAATGCTGGATTATGCAAGGAAAGAAACAAAGGATGCTTGGAGCTATGTATTCACACAGATGAAACTGATAATGTTCTCTTGCAATCAGAGACATGTCTAGAGTTCCCTCAAAGGACCCAAGTACCAATGCCCCAAAATATCCTTCATTTGGTGCCAAACATTTTGTCCAATTGCATTGAAGGAAGCACTTTGAAGAGAAAATATTGCCATGCTGATGGGAAGCAATATGTCCCTGCCACAAATCCACTTGATTCTTCCTTATTGCACCAAGAGATTTTCCAAGTGGATGAAAATTGTAATGGCACACCTCTGGATAAAAGTGTTTTGAAAACTCAGAAAAGGAGGAAAACTCAAAATAAACTGGGTTCACAAAAAGTAAGAAGAAAAGGAAAAAATAAATCTCAAACACAATTGACTGATGAGAAATCAAGCTGCTATGCTGGTGATGGCCTTACTAACTCAGATGCACTACAAAAGATATGTCCTACACCAATTGATGAGATCATTTGTCAACTCAAAGATCTCAACCTTGGGGACAGCGATATATCAAGAATAGATGGACAAAGTGCAAGTGTCCTATATAACGGAGAAAATTCAGTTGTCCCGTATGAGGGGTTTGACTTTGCAAAAAAACGCAAACCACGGCCCAAAGTGGATCTTGACCCAGAAACAGAGAGAACCTGGAAACTATTGATGGACAAGGGAGTAAGCGAAGAAGGCCTTGAAGGAAATGACAAGGAAAAGGAGAAGTGGTGGGAAGAGGAAAGAGAAGTTTTTCATGGAAGAGTCGATTCCTTCATTGCACGAATGCATCTTGTTCAAGGAGATAGACGCTTTTCACGGTGGAAGGGATCAGTAGTGGATTCAGTGATAGGAGTCTTCCTTACTCAGAATGTTTCAGATCATCTTTCAAGCTCAGCCTTCATGTCTCTAGTAGCAAGGTTTCTTCTTAAGTCAGAAAGTGACAATAGATCATGCTGTATTGTTGGTACGGAAAAATTGGTCGAAAAACCAGAAGCCTGCATAGTAAATCGAGATGACATCATGATATCATCTGACAAAAGATTGAGTCACCCAACCTACCATCAAGGTTTTGTGCCTCCCCATGATACAAGTGAGCACTGGAGAGACTGCGAGACCTCAAGAATAAAAAGAAGTCTAGAAGGTCCATATAACCAGAGCTCAAAGGATGAAATCATATTCTCACAAGATTGCCTTGATCACTCAATTGCTGAAGCCACAAGAGGGATAAGATCCTGCTCAGGTTCCAACTCAGAAGCAGAAAGCACTTCAACTGGGTGTGAACCCTGGAAGACTCAACTTTTAAATTCAACAAATTCTGTACAGGTAGGAAATACCACACCGTTCCAAGAATTTTACAGTAGTGTAAATGGAGTGTCACTGTTTGACGAGAGAACCAAAGATGGACCGGTTCTACATGCGAAATATCCCAAACAAAAATCAAGATCAGGTGAAACTGATGATCTTATTTTGCATTCAGCATTTAATCATTTGATCAATTCCGGAAATTCACAAAAGCTAGTGCCTGAAGTTTATTCAACAGACTATGAGTTACATGAATTAGAGGCACCTGGGATGTTGAAAACTTCTCAAATGAATGGTAAGGAGTCTTCTGGGCCAGAAACTATTTCCCTCATCAATAAGTTACAAGATACTGACTGTGGGAGAGTCAGCATCCAGGATGTAGGAGGAAATGTAGATAAAGTGACTGAGAAGCAATATGGGCCAATTAAGTCCCAGGAGTTACCAACAATTAACCCATATGAACCGTTAAGTGTTCATGTTGTCCAACTGCAAGATAACTCTCCATCAGGATCTGAGACAAATCATCATCAACCTTTATCTGGCCATCATATTGCTGGTGAAAAAATTTTAAAACCCAATGGCATGCCATTAATAGAATCAGTAAGTACTACTCAGAAATTGAGCACAGGGCAGTATGATTCAGCGAAGAATTCTCCTAATCACATGGAAGGTTTTCATGCTGAAAAGAGAATATCTGAGGTAAATGGACAAGCCTACTCGAATGATGGAATTGCTGAACCGAAGCCTCAGGAGCAACTTTGCACTTCTGGCACCACGAATATAGAGAGCAAACAGAAAGTTTCAAAATCCAGGAAAATAAAGCTTGAGACAGAGAAGATGAACAAAGTTAATTGGGATGATTTAAGAAAGCAAGCTCAGGCCCATGGGACAAAAAAAGAAAGGAGCAAAGAAGCAATGGATTCACTAGACTATGAAGCACTGAGACGTGCCTCAGTTAAAGAAATCTCTGATACTATTAAAGAACGAGGAATGAACAATATCCTAGCAGAACGAATCAAGGAATTTTTGGACAGACTGGTTAGAGAACATGGAAGCATTGATTTGGAGTGGTTAAGAGATGTTCCTCCTGATAAAACGAAAGATTATTTGCTAAGCATACGTGGATTGGGGCTGAAGAGTGTGGAGTGTGTACGGCTTCTAACGCTTCATCATCTTGCTTTCCCAGTTGACACAAATGTTGGAAGGATAGCAGTTAGACTTGGATGGGTCCCTCTTCAACCACTTCCTGAATCACTTCAGTTACACCTCCTGGAATTGTATGAGCTGCACTACCAGATGATTACCTTTGGAAAGTGTCTTTGTTCTGGCATGTTAATGCAAGATGCTTGTTGTGCTATTTGTAGATGGAGTGCCCGGCTTGCATTGCCTGGACCAGAAGAGAAAGGAATGGTGTGTAATCCCGTTCCCATTGCCACTCAGAGCAATCCTACTCTCAATATGAATGCTGGGGCACTACCTCTCCCTGCCAACCATTTGCTTAGAGAAGCAAATTCTGAAATTCGTGGGTGTGAGCCAATCATTGAAGAACCGGCAACACCAGAACAAGAGTGCCTAGACACACAGGCATTGGAAATTGACATTGAGGACTCGTTCTGGGAGGATCCTGATGATTTTCCTACTATCAAGCTCAATACCGAAGAGTTTGCAATGAATATACAAAACATATTACAAGAAAACATGGAGCTTGTGGAAGGTGACTTGTCTAAGGCTCTCATTGCTTTAAATCCAGCTACAGCTTCTATTCCTACACCAAAACTGAAGAATGTGACTCGGCTACGGACAGAACACCATGTATATGAGCTTCCGGATTCTCATCCTCTCTTGGAAAAGATGGATATGCGTGAACCTGATGACCCAAGCCCATATCTTCTTGCAATTTGGACACCAGGTGAAACTGCAAATTCGATTGAGCAACTAGAGAGAAGATGCAAATCCCAAGACTCAAACAGCCCATGCAATGACAACACATGCTTTTCATGCAATAGCGTTAGAGAGGCTAATTCGCAAACAGTCAGAGGAACTCTCCTGATACCTTGTAGAACAGCAACAAGAGGGAGCTTTCCACTTAATGGTACTTACTTTCAAGTTAACGAGGTATTTGCAGACCATGCATCCAGCATTCAACCCATTGATGTCCCTAGGGAATGGCTATGGAATTTGCCAAGGAGGACTGTGTACTTTGGAACATCTGTAACATCCATTTTCAGAGGTCTCACAACTCAAGGGATTCAACAGTGCTTTTGGAGAGGGTTTGTTTGCGTCAGAGGGTTTGACCAAAAAACGCGCGGGCCTCGCCCTCTTATGGCCAGATTTCATTTTCCAGCTAGTAGATTAAATAGAGGAGAAAACGCGAAAACAAGAGATTAA 5337 0.4133 MNGSCGSWVPVTPEKPVQIRPDTISAGWRENRMVGGNLKMLTVPGSGYMKEMLQCNGLQNVHLVGQTEECNYFEGGSSARASVINRIDVDFDSNRLNALELLFMKNASNNRYVDRNLSESISMAVRTPVLPKFHPHTRSNGRDFNADGFTVNKNRNYSDSDSVYTDANLSVPNRNSECDSSNLYDFLNNTHCSFSSLLNSSLSEPEIPNGGFYVHCRPNYDENSADVTEADDVFSFTNSFQSVTGTMDQFNKFTDNQFMKYVTAESQIQVTDRLDNLVVSTENDHHEYCDGLLQHIIDTSTAISKSHDQNEGSENNHCSGNGLDIDLNKTPEQKPPKRRKHRPKVVVENKPKRTPNPETRKKRGSTENPRQKRKYVRKNVPKEGATPQADVLETLGSATATRKSCRKALNFDLEENRCQDQTATRKSCRKALNFDLEENRCKDQNKSVDQQEIQSRNGLLTELLSAASVCYNTNSALILGKQDGLTVENQQPRSTDDGACLLHQRLSDRYLPKEQANGPLSANTEMQIRNFLETEKGPAQDNAGLCKERNKGCLELCIHTDETDNVLLQSETCLEFPQRTQVPMPQNILHLVPNILSNCIEGSTLKRKYCHADGKQYVPATNPLDSSLLHQEIFQVDENCNGTPLDKSVLKTQKRRKTQNKLGSQKVRRKGKNKSQTQLTDEKSSCYAGDGLTNSDALQKICPTPIDEIICQLKDLNLGDSDISRIDGQSASVLYNGENSVVPYEGFDFAKKRKPRPKVDLDPETERTWKLLMDKGVSEEGLEGNDKEKEKWWEEEREVFHGRVDSFIARMHLVQGDRRFSRWKGSVVDSVIGVFLTQNVSDHLSSSAFMSLVARFLLKSESDNRSCCIVGTEKLVEKPEACIVNRDDIMISSDKRLSHPTYHQGFVPPHDTSEHWRDCETSRIKRSLEGPYNQSSKDEIIFSQDCLDHSIAEATRGIRSCSGSNSEAESTSTGCEPWKTQLLNSTNSVQVGNTTPFQEFYSSVNGVSLFDERTKDGPVLHAKYPKQKSRSGETDDLILHSAFNHLINSGNSQKLVPEVYSTDYELHELEAPGMLKTSQMNGKESSGPETISLINKLQDTDCGRVSIQDVGGNVDKVTEKQYGPIKSQELPTINPYEPLSVHVVQLQDNSPSGSETNHHQPLSGHHIAGEKILKPNGMPLIESVSTTQKLSTGQYDSAKNSPNHMEGFHAEKRISEVNGQAYSNDGIAEPKPQEQLCTSGTTNIESKQKVSKSRKIKLETEKMNKVNWDDLRKQAQAHGTKKERSKEAMDSLDYEALRRASVKEISDTIKERGMNNILAERIKEFLDRLVREHGSIDLEWLRDVPPDKTKDYLLSIRGLGLKSVECVRLLTLHHLAFPVDTNVGRIAVRLGWVPLQPLPESLQLHLLELYELHYQMITFGKCLCSGMLMQDACCAICRWSARLALPGPEEKGMVCNPVPIATQSNPTLNMNAGALPLPANHLLREANSEIRGCEPIIEEPATPEQECLDTQALEIDIEDSFWEDPDDFPTIKLNTEEFAMNIQNILQENMELVEGDLSKALIALNPATASIPTPKLKNVTRLRTEHHVYELPDSHPLLEKMDMREPDDPSPYLLAIWTPGETANSIEQLERRCKSQDSNSPCNDNTCFSCNSVREANSQTVRGTLLIPCRTATRGSFPLNGTYFQVNEVFADHASSIQPIDVPREWLWNLPRRTVYFGTSVTSIFRGLTTQGIQQCFWRGFVCVRGFDQKTRGPRPLMARFHFPASRLNRGENAKTRD 1778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g2701 1778 Pfam RRM in Demeter 1663 1763 IPR028925 -
Lele07g2701 1778 PANTHER TRANSCRIPTIONAL ACTIVATOR DEMETER 297 1774 IPR044811 GO:0019104|GO:0035514|GO:0080111
Lele07g2701 1778 MobiDBLite consensus disorder prediction 348 380 - -
Lele07g2701 1778 CDD ENDO3c 1295 1402 IPR003265 GO:0006284
Lele07g2701 1778 SMART endo3end 1280 1422 IPR003265 GO:0006284
Lele07g2701 1778 MobiDBLite consensus disorder prediction 654 673 - -
Lele07g2701 1778 SUPERFAMILY DNA-glycosylase 801 1436 IPR011257 GO:0003824|GO:0006281
Lele07g2701 1778 Gene3D Hypothetical protein; domain 2 1280 1374 - -
Lele07g2701 1778 MobiDBLite consensus disorder prediction 303 323 - -
Lele07g2701 1778 MobiDBLite consensus disorder prediction 303 387 - -
Lele07g2701 1778 Pfam Permuted single zf-CXXC unit 1630 1660 IPR028924 -
Lele07g2701 1778 MobiDBLite consensus disorder prediction 652 686 - -
Lele07g2701 1778 Gene3D - 1375 1440 IPR023170 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g2701 Lele-ChrLele07 32523170 32534439 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele07g2701 07 32523170 32534439 Lele14g1634 14 23930618 23937111 CCT
Lele07g2701 07 32523170 32534439 Lele15g0722 15 4171883 4179143 CCT
Lele07g2701 07 32523170 32534439 Lele16g0729 16 4111822 4119496 CCT
Lele13g1689 13 25515797 25516342 Lele07g2701 07 32523170 32534439 CCT
Lele14g1629 14 23902249 23902794 Lele07g2701 07 32523170 32534439 CCT
Lele15g0728 15 4208018 4208563 Lele07g2701 07 32523170 32534439 CCT
Lele16g0733 16 4148732 4149277 Lele07g2701 07 32523170 32534439 CCT
Lele07g2701 07 32523170 32534439 Lele07g2701 07 32523170 32534439 ECH
Lele05g2678 05 42670402 42673230 Lele07g2701 07 32523170 32534439 hybridization
Lele06g2664 06 34504455 34514063 Lele07g2701 07 32523170 32534439 hybridization