Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g2693 ATGGCTACTGAGGACTTCCCTCTTATTGACTCCCCCTCGCACAACCCCCACTCGCAACCTCTCCTCCACGCTCACACGCGCCCGTTCCCTTCCTCCTCTAGCCCCACCACTGGAGTTGCAGCTACCTCCGCCGATGCCGGCGACTCCTCCAACGCTTACTTCACTCAACCCTTTCCCGACGATGGCGAAGATTCCTCTGATCTGAACAAATCCACGTCCGGAGCCTTGACCCCTAATTCGAAGCGTACTGCAGTCGACAGCTCCTATTACTATAACAAGAAGTCGAAATCCTCCGCCGCTGGTGGCGGAGGCAGCGTTGCTACGAGCGCTGAACCTGATTTAGGATCCGAAGCGACTTACCGGAAGGATCGCGAGGAATGGAGTGACACGGCGATTGAATGTCTCCTGGACGCTTACACAGAGAAACTGAACCAGCTGAATCGCGGAAATCTGCGCGGGCGCGATTGGGATGAGGTGGCGAGAGCCGTCAGCGAGCGGTGCTCCGTTGGTGGCAGTGCCGATGGAAAGAACAAATCGTATAAGAGTGTGGAGCAATGCAAGAACAAGATTGATAATTTGAAGAAGAGATACAAGGTGGAACTTCAGAGGATAAGTAGTGGCAGCATCGCATCGAGTAACTGGCACTGGTTTAAAAAGATTGAAGCTATTGTTGGGAACTCAGTGACTGTGAAGAGGGTGTCAGATGATGAGAAGGCTGGTGGAGCTAATTCCTTGTCTGCAGCGAGACGCCCAAAGAACAGATATACACCTACCAATGTTGCAGTGTTGAATAACCCGAAAACAAAACCAGCATCTAATCTCAAATGGCATAGAGTTCTGTTTAAAATCAGTGGATCTGCTTTAGCTGGAAACTGCCAAAGTATTGACCCCAAGGTGGCAACGCAGATTGCTGGGGAAGTGGCGAAAGCTTGCCGCCTTGGTGTAGAGATTGCCATTGTTGTTGGTGGTCGTAACTTTTTTTGTGGAGATTCCTGGGTGTCTGCTACTGGATTGGACAGACCTACGGCTTACCAAATTGGTATGATGGCGACGGTTATGAATTCTATTCTGCTTCATTCTGCTTTGGAGAAACTGGGCATTCAGGCACGTATTCAAAGTGCATTCTCTGTGCCAGAGATTGCTGAACCTTATAGCAGGCAACGAGCTATCCGACATCTCGAGAAAGGAAGGGTTGTCATACTTGGTGGTGTTGGTGCTGGCACCGGAAATCCTATCTTTACCACTGATACAGCTGCAGCTCTGAGAGCTTCCGAGCTTAATGCAGATGTTATGCTGAAAGGAACCAATGTTAGTGGGGCCTATGATTGCCATGCTGGCAGTGAGAATGTGACACCTGATCACATTTCTTTTAGGGAAGTTGCTTCGAGGGGCATCACTTCCATAGATATGATGTCATTAGCATACTGTGAAGAGAATGGAATTCCAGTTGTAGTCTTCAACATGCTTGAACCGGGGAATGTTTCAAGAGCACTATGTGGAGATCAAATTGGCACCTTGATTGATCAAACAGGAAGTATTAATTAA 1545 0.4893 MATEDFPLIDSPSHNPHSQPLLHAHTRPFPSSSSPTTGVAATSADAGDSSNAYFTQPFPDDGEDSSDLNKSTSGALTPNSKRTAVDSSYYYNKKSKSSAAGGGGSVATSAEPDLGSEATYRKDREEWSDTAIECLLDAYTEKLNQLNRGNLRGRDWDEVARAVSERCSVGGSADGKNKSYKSVEQCKNKIDNLKKRYKVELQRISSGSIASSNWHWFKKIEAIVGNSVTVKRVSDDEKAGGANSLSAARRPKNRYTPTNVAVLNNPKTKPASNLKWHRVLFKISGSALAGNCQSIDPKVATQIAGEVAKACRLGVEIAIVVGGRNFFCGDSWVSATGLDRPTAYQIGMMATVMNSILLHSALEKLGIQARIQSAFSVPEIAEPYSRQRAIRHLEKGRVVILGGVGAGTGNPIFTTDTAAALRASELNADVMLKGTNVSGAYDCHAGSENVTPDHISFREVASRGITSIDMMSLAYCEENGIPVVVFNMLEPGNVSRALCGDQIGTLIDQTGSIN 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g2693 514 Gene3D - 267 513 IPR036393 -
Lele07g2693 514 MobiDBLite consensus disorder prediction 68 104 - -
Lele07g2693 514 Hamap Uridylate kinase [pyrH]. 274 508 IPR015963 GO:0005737|GO:0006221|GO:0033862
Lele07g2693 514 Pfam Myb/SANT-like DNA-binding domain 124 223 IPR044822 -
Lele07g2693 514 CDD AAK_UMPK-PyrH-Ec 278 508 IPR015963 GO:0005737|GO:0006221|GO:0033862
Lele07g2693 514 FunFam Uridylate kinase isoform A 268 513 - -
Lele07g2693 514 Coils Coil 176 203 - -
Lele07g2693 514 FunFam Aspartate/glutamate/uridylate kinase family protein 127 199 - -
Lele07g2693 514 Gene3D - 127 199 - -
Lele07g2693 514 SUPERFAMILY Carbamate kinase-like 275 507 IPR036393 -
Lele07g2693 514 MobiDBLite consensus disorder prediction 12 56 - -
Lele07g2693 514 Pfam Amino acid kinase family 278 487 IPR001048 -
Lele07g2693 514 PANTHER URIDYLATE KINASE 120 513 - -
Lele07g2693 514 MobiDBLite consensus disorder prediction 1 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g2693 Lele-ChrLele07 32462000 32464857 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g2693 127 230 Trihelix Transcription Factor Family AT3G14180 39.423 3.40e-16 79.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lele07g2693 AA_kinase 3.3e-20 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g2670 05 42614556 42617428 Lele07g2693 07 32462000 32464857 hybridization
Lele06g2657 06 34451985 34454982 Lele07g2693 07 32462000 32464857 hybridization