Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g2692 ATGGCCGCTCCGAAGCCACGCAATACTCGATCCACGGCTCTTAGGGACGCCTCTGACTCTTCCAAGATGGATGGCACAGGTACCTGGGATGCCCTCCAATGGACCAAGTTTCAGCCTGGTTCACGCTACGTTTCGCATGCCAATTTGGATTTCTTGCTGGAGGAAGAAAACGTCATAGCCCAGGGACATGGTATTGTACTTATTAATTCAGATGATGCAGGCACATTGATGGTCACAAATTTTCGTCTTATTTTCCTGAGTGATCGAACTAGAAATATTATTTCCCTTGGAACAATTCCTCTTGCGACGATTGAGAAGTTTAACAAGATAGCTGTAAAGGTGCAGTCAGCTAATCGTCAATCAGACAAGACACCCCCACAAAGACTGCTCCAGGTTATTGGAAAGGATATGAGAATTATCGTTTTTGGTTTCAGGCCTCGTACAAAACAGAGGCGTGTCATATTTGATGCGTTACTAAGAAGTACAAAGCCAGCTGTACTATGGGATCTTTATGCATTTGTATGTGGACCTTCTAGGTTTACTAACTCTAACCCAAAGGTGCGCCTACTAGATGAGTATTTCCGACTTCTTGGAAAACGCTTTTACCGTGCTTCAGTCAATATGATTGAAAGTGGGTCCTTTACCCTGTCGAATGACTTGTGGAGAATAAGTAAAGTGAACTCTAACTACAACGTGTGCCAGAGCTATCCTTTCGCTTTGATTGTACCGAAGACAATAATTGATGATGAAGTGCAACAAGCTTCCACCTTTCGTGGTAGATGTCGGGTTCCTGTAGTTTCATGGTGCCACCCAGATACGGGAGCAGTTCTTGCACGTTCATCCCAACCTTTAGTTGGTCTCATGATGAATATGAGGAGCAATGCAGATGAAAAGCTCGTGGCTGGAATATGTGGCAAGCTTAGTGATGACTCACGCAGGAAGCTTTATATTGCTGATGCAAGACCGAGGAAGAATGCATTAGCTAATGGGGCCATGGGAGGTGGTTCAGAATCATCTTCAAATTACTTTCAGTGTGAGGTAGTTTTCTTTGGCATAGACAACATCCATGCAATGAGAGAAAGCTTTGCTCGGTTGAGAGAATACCTAGACACTCATGGCAAAGCATCATCAGATGGAATGTCATCTTTTTTGAGACATGGTGGGTCAACATGGGGTGGAGGCAATCTAAGTAGTATGTCTACTTCAGTATCTACTCTTGGGGACAGTGGATGGCTACTACACGTTCAAAGTGTCTTAGCTGGTGCTGCTTGGATTGCTGCTCGCCTTGATATGGAAAAGGCTTCTGTTCTTGTACATTGCAGTGATGGCTGGGATAGAACAAGTCAGTTGGTTTCTCTTGCTAATTTGTTACTTGATCCATACTATCGCACATTCCAAGGGTTTCAGGCACTTGTTGAAAAAGACTGGCTAGCATTTGGTCACCCATTTTCCGATCGGATGGGAATGCCTTCGGTCTCTGGAAGTGGCAACATGCATTTTGAGTTGACTAGACAGTCTTCTACTGGAAGTTGCCCTTCACCACCCATGCGCCAGTCATCATTCACATCTCAGTCATCCCCTTCTCATGCACAGACCTCAAACCACTACTCTCCCATTTTTTTGCAGTGGGTTGATTGTGTTTCACAACTGCTGCGGATGTATCCTTTTGCTTTTGAATTCTCCTCGGTTTTCCTGGTGGACTTCCTAGACTGTGTTCTTTCTTGTCGATTTGGAAACTTCTTATGTAATAGTGAGAAGGAAAGGCAGCAATGCAATGTTTTTGAAGCTTGTGGATGTTTGTGGGCATACTTGGCTGACTTGCGTGCTTCTGAAGGAAAATCTCATGTCCATTGTAATCTCTATTATGATCCATCGAAGTACAATGGTCCTATCTTTCCCCCAGCAGCAGCTTTAGCCCAAACACTCTGGCCCCAATTTCTTCTTCGCTGGGCCTGTCCAGAAGAAGCGCAAGCTGCTGTTGAAATTGAAGCAGAATGCAGACAAATGTTTCTAAAATACTCTGAGATGCAGAAGGCTAAAGAATTGGCAGAGAGGAAAGCCAAAGAAATTGAAATTGCCATGGAATCATTGAGTTCAGAATTACGTAACGAGAAACAGTTAAGATGGTCAGCTATGAACATGACCAAGAAAACAAGCAGACAGAATGTGGCCATAAAACGAGCAATTCAGTCACTGGGATGCAAGTTTCACTTATCTGACAACGGCGATTGTGTTTTTGATATTGAAAGCAACTTAGTGGGGTCAGGGTCAGCACAAACCACTCTGTACCCTTCCACCAGAAAGGATTTGGATGGTACATCACATGATGACAAGAAGGATCTGTCTATTTCAGTAGCAATCACGGAGGATGATGATCATGACGATCATGCAAACAATGCAATTGTTAGAGTATGTGAAGCTCTATGCCCACTTCGTACTCCAAATGGAAGCTGCAGTTGGCCAAATGCCGGTTGTGCGCGACTAAGTTGTCAGTTTGTTGGTTTAAGGGCAAATTTTGATGCATTTGACCAATTGTCGATTGATGATAGTTACTTCAAATCTGAATGA 2568 0.4381 MAAPKPRNTRSTALRDASDSSKMDGTGTWDALQWTKFQPGSRYVSHANLDFLLEEENVIAQGHGIVLINSDDAGTLMVTNFRLIFLSDRTRNIISLGTIPLATIEKFNKIAVKVQSANRQSDKTPPQRLLQVIGKDMRIIVFGFRPRTKQRRVIFDALLRSTKPAVLWDLYAFVCGPSRFTNSNPKVRLLDEYFRLLGKRFYRASVNMIESGSFTLSNDLWRISKVNSNYNVCQSYPFALIVPKTIIDDEVQQASTFRGRCRVPVVSWCHPDTGAVLARSSQPLVGLMMNMRSNADEKLVAGICGKLSDDSRRKLYIADARPRKNALANGAMGGGSESSSNYFQCEVVFFGIDNIHAMRESFARLREYLDTHGKASSDGMSSFLRHGGSTWGGGNLSSMSTSVSTLGDSGWLLHVQSVLAGAAWIAARLDMEKASVLVHCSDGWDRTSQLVSLANLLLDPYYRTFQGFQALVEKDWLAFGHPFSDRMGMPSVSGSGNMHFELTRQSSTGSCPSPPMRQSSFTSQSSPSHAQTSNHYSPIFLQWVDCVSQLLRMYPFAFEFSSVFLVDFLDCVLSCRFGNFLCNSEKERQQCNVFEACGCLWAYLADLRASEGKSHVHCNLYYDPSKYNGPIFPPAAALAQTLWPQFLLRWACPEEAQAAVEIEAECRQMFLKYSEMQKAKELAERKAKEIEIAMESLSSELRNEKQLRWSAMNMTKKTSRQNVAIKRAIQSLGCKFHLSDNGDCVFDIESNLVGSGSAQTTLYPSTRKDLDGTSHDDKKDLSISVAITEDDDHDDHANNAIVRVCEALCPLRTPNGSCSWPNAGCARLSCQFVGLRANFDAFDQLSIDDSYFKSE 855
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g2692 855 ProSiteProfiles Myotubularin phosphatase domain. 198 647 IPR010569 -
Lele07g2692 855 MobiDBLite consensus disorder prediction 504 531 - -
Lele07g2692 855 Coils Coil 673 707 - -
Lele07g2692 855 SMART gram2001c 41 111 IPR004182 -
Lele07g2692 855 PANTHER MYOTUBULARIN-RELATED 43 761 IPR030564 -
Lele07g2692 855 Gene3D - 63 162 IPR011993 -
Lele07g2692 855 MobiDBLite consensus disorder prediction 1 25 - -
Lele07g2692 855 ProSitePatterns Tyrosine specific protein phosphatases active site. 438 448 IPR016130 GO:0016311|GO:0016791
Lele07g2692 855 SUPERFAMILY PH domain-like 52 175 - -
Lele07g2692 855 Pfam Myotubularin-like phosphatase domain 186 589 IPR010569 -
Lele07g2692 855 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 213 651 IPR029021 -
Lele07g2692 855 CDD PH-GRAM 74 158 - -
Lele07g2692 855 CDD PTP-MTM-like 261 549 - -
Lele07g2692 855 MobiDBLite consensus disorder prediction 11 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g2692 Lele-ChrLele07 32443429 32461019 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g2692 1 853 Protein tyrosine phosphatase (PTP) family AT3G10550 64.953 0.0 1147
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g2669 05 42602270 42613572 Lele07g2692 07 32443429 32461019 hybridization
Lele06g2656 06 34439184 34450695 Lele07g2692 07 32443429 32461019 hybridization