Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g2665 ATGGGTCGCGAGACGTTGCCAGTTCCAGCTCCACCAGCCCCAGCAGTGACAATACCGAATCCAACATCACCAGTAGTAGCACCACAAGCTCCTCCTACATCACTGGCTCCTGGGTTTCGATTTCACCCAACTGATGAGGAGCTCGTTATTTACTACCTTAAGCGTAAAGTTTGTGGAAAAACTTTCCGATTTGATGCAATCTCTGAGGTCGACATTTACAGAAGCGAGCCTTGGGACCTAGCAGATAAGTCGAGGTTAAAGACAAGGGACCAAGAATGGCTTGTTGATGAAGAGCTGGAAAGAGCTGGAATTGGGTCGACCCAGAAGTTTGAAGTTATTTCTTATTCAGTTATCTTCCGAGCAAGCAAACAGCACTTTGTTGTTTTGTTTCGAGTATTTCACAAAAATAACATAGGACCTCCAAATGGTCAACGTTATGCACCTTTCATTGAGGAAGAATGGGATAATTCATCAGCAATGATTCCAGGGGCAGAGCCCATAGAAGAAGCTACAGCGGTCCATCGCCCACTCATCGAAGGCAATGGCCACGTTGGCTGTTTTGAAGGAACTAATGTAGTCCAGGACCTGAGGGAGTACTTGTTTGTGATTGTAGTCTGTGTTCTTGACATCTCAAGAAACATGTTACATCACTTTTGTAGCATAAATGCATCATGGAATTATGGGTTTCTCTGTTTTGGCATTGTTGCTGAGTTTACCTTTCATGTGCTAAATTGCTTTCTCAATTCTGGTTCATTCTTTCAGGATACTTATTCCATCAATAAAGCTCCTCTTGATGTGAATAAGCTACCAATTGAAACTCAAAATCTTCTAGCTGTCTGCAAGAGGGAGAGCATGGCTGAGTATCCGTCACCCGAAAGGGATAATTCTAAGGCTATGGATGAGTACCCGTCACCACAAACAGACAATCCAAAGCCATTCTCGCTAATATACAAAAGAAGGCGGCATAATTTGAACTCTAATAATTCGAATGTTCCTGAGCATTTGGCCCGTAACGGCCAGGATCCATGTTCATCGATAATAACAACTGCCGCAACAACACTCCCGGCTACAACCACCACAACTGCCAGCACTTCGTCGAGAAAACACTTTTTGTCTGCATTGGTGGAGTTTTCCCTACTTGAGTCTCTCGAACCTAAGGAAAGTCCTTCGCTTCGTGTGCCAGAATTCGACCCCTCTACTCTCAACTCACCCTTGCCCCCGAGCTGCATGAAGTTCATCCAGCAGTTGCAGGACGAGGTCCGCAAACTCTCAGTGGAAAGGGAGACGATGAAGTTCGAGATGATGAGTGCGCAGGCCATGATAAACATCCTGCAATCGCGTATCGACGCGCTGACCAGAGAGAACAAGGATTTGAAGAGAGGCACTGATGCGTAG 1395 0.4559 MGRETLPVPAPPAPAVTIPNPTSPVVAPQAPPTSLAPGFRFHPTDEELVIYYLKRKVCGKTFRFDAISEVDIYRSEPWDLADKSRLKTRDQEWLVDEELERAGIGSTQKFEVISYSVIFRASKQHFVVLFRVFHKNNIGPPNGQRYAPFIEEEWDNSSAMIPGAEPIEEATAVHRPLIEGNGHVGCFEGTNVVQDLREYLFVIVVCVLDISRNMLHHFCSINASWNYGFLCFGIVAEFTFHVLNCFLNSGSFFQDTYSINKAPLDVNKLPIETQNLLAVCKRESMAEYPSPERDNSKAMDEYPSPQTDNPKPFSLIYKRRRHNLNSNNSNVPEHLARNGQDPCSSIITTAATTLPATTTTTASTSSRKHFLSALVEFSLLESLEPKESPSLRVPEFDPSTLNSPLPPSCMKFIQQLQDEVRKLSVERETMKFEMMSAQAMINILQSRIDALTRENKDLKRGTDA 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g2665 464 MobiDBLite consensus disorder prediction 1 29 - -
Lele07g2665 464 ProSiteProfiles NAC domain profile. 35 179 IPR003441 GO:0003677|GO:0006355
Lele07g2665 464 SUPERFAMILY NAC domain 29 93 IPR036093 GO:0003677|GO:0006355
Lele07g2665 464 Pfam No apical meristem (NAM) protein 37 93 IPR003441 GO:0003677|GO:0006355
Lele07g2665 464 MobiDBLite consensus disorder prediction 7 29 - -
Lele07g2665 464 Gene3D NAC domain 44 113 IPR036093 GO:0003677|GO:0006355
Lele07g2665 464 Coils Coil 413 461 - -
Lele07g2665 464 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 34 94 - -
Lele07g2665 464 MobiDBLite consensus disorder prediction 287 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g2665 Lele-ChrLele07 32199737 32206318 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g2665 1 460 NAC Transcription Factor Family AT3G10480 34.229 5.89e-60 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele07g2665 NAM 1.2e-13 No_clan