Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele07g2662 | ATGGAAGCTCCAGAAGAAGTCGTCGTCATCTCTAAAGAGCAAACCCAGATCGTCAAAGGCAAAAGAACCAAAAGGGTAAGGCCACAGTCTCCATCGCCAATCGCCAACAAATCCGAAGAAGATCAATTTCTAGGTGAAGATCATAATAATACCAAGAACAGCTCTGCCTCCAATGCCGCCACAACAACTTCTTCTGCAGAATTTGAAGATCATAATCGTATCATTATTAACAATAGCAGTAGCAGCACAGAGGAAGAGGAGGACATGGCCAATTGCTTGATCCTTCTGGCTCAAGGCCAATCTCGGTATTCTCCGAAACTCGCCGAGGAAGACGGTAACATGATGATGATTATGAAGCCTAACAACAATAACAACAACTATAATAATAATAACAGCAGTAGGAAATTCATGGAAGCGTCCACTATTGGAGGAGCTAACAAAGCAGGTTCTTACGTTTATGAATGCAAGACATGTAATAAAACCTTCCCTTCTTTTCAAGCACTCGGAGGCCACAGAGCAAGCCACAAGAAGCCTAAGACCTTGTCGTCGCCTCCAATGGCCGCCACCATTGCAGACAAAGAGAAGAAGAAAGAACAAGAGTTTACTATACACAAAAACAACAGCACGCTTTCTTTTCAGCTTCTGAATAGTGGTGTCAATGGTGGTAATAATAACAAGAATAAGGTTCATGAGTGTTCTATTTGTGGGGCGGAGTTTGCTTCTGGTCAGGCTTTAGGTGGACACATGAGAAGGCACAGAGCACCCATTGGAACGACGACAACGACAACGAACAATGCGACGATGTCGATGGCGCTTAAAAACAACAATCCAGTGGGTCTGGCTTTGGAAGCAGATAAACAATATAACAATGAAGATCATCATCATCAACCCAGAAAGAAAAGGAACGTTTTGTCTTTGGATTTAGATCTTAATCTTCCTGCCCCAGAAGATGATCATCATCATCAGAGCGATTCATCCTCTTTTGCGTTTGAACCCAAGAATAAGCAGAAGCAGCAGCAAAAACAACAAGCAAGTCTGGTTTTTTCATCTGCACCTGCTTTGGTGGATTGCCATTACTGA | 1080 | 0.4296 | MEAPEEVVVISKEQTQIVKGKRTKRVRPQSPSPIANKSEEDQFLGEDHNNTKNSSASNAATTTSSAEFEDHNRIIINNSSSSTEEEEDMANCLILLAQGQSRYSPKLAEEDGNMMMIMKPNNNNNNYNNNNSSRKFMEASTIGGANKAGSYVYECKTCNKTFPSFQALGGHRASHKKPKTLSSPPMAATIADKEKKKEQEFTIHKNNSTLSFQLLNSGVNGGNNNKNKVHECSICGAEFASGQALGGHMRRHRAPIGTTTTTTNNATMSMALKNNNPVGLALEADKQYNNEDHHHQPRKKRNVLSLDLDLNLPAPEDDHHHQSDSSSFAFEPKNKQKQQQKQQASLVFSSAPALVDCHY | 359 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele07g2662 | 359 | MobiDBLite | consensus disorder prediction | 14 | 66 | - | - | |
| Lele07g2662 | 359 | PANTHER | ZINC FINGER PROTEIN ZAT5 | 78 | 338 | - | - | |
| Lele07g2662 | 359 | SUPERFAMILY | beta-beta-alpha zinc fingers | 152 | 252 | IPR036236 | - | |
| Lele07g2662 | 359 | MobiDBLite | consensus disorder prediction | 48 | 66 | - | - | |
| Lele07g2662 | 359 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 232 | 252 | IPR013087 | - | |
| Lele07g2662 | 359 | Gene3D | Classic Zinc Finger | 127 | 208 | - | - | |
| Lele07g2662 | 359 | Gene3D | Classic Zinc Finger | 209 | 296 | - | - | |
| Lele07g2662 | 359 | SMART | c2h2final6 | 153 | 175 | IPR013087 | - | |
| Lele07g2662 | 359 | SMART | c2h2final6 | 230 | 252 | IPR013087 | - | |
| Lele07g2662 | 359 | Pfam | C2H2-type zinc finger | 229 | 255 | - | - | |
| Lele07g2662 | 359 | Pfam | C2H2-type zinc finger | 152 | 178 | - | - | |
| Lele07g2662 | 359 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 155 | 175 | IPR013087 | - | |
| Lele07g2662 | 359 | MobiDBLite | consensus disorder prediction | 311 | 347 | - | - | |
| Lele07g2662 | 359 | MobiDBLite | consensus disorder prediction | 312 | 326 | - | - | |
| Lele07g2662 | 359 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 153 | 180 | IPR013087 | - | |
| Lele07g2662 | 359 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 230 | 252 | IPR013087 | - | |
| Lele07g2662 | 359 | MobiDBLite | consensus disorder prediction | 327 | 347 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lele07g2662 | Lele-ChrLele07 | 32167454 | 32168533 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lele07g2662 | 1 | 359 | C2H2 Transcription Factor Family | AT5G04390 | 42.172 | 3.17e-78 | 243 |
Transcription factors information