Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g2660 ATGCTGACGAAACTGCGTCACAATAATGGTTCCTTACCTGTCTTTCAGAGTGGTTTTATGGTCGCAATTCCTGGAAGTAAGGTAAGGAATGTGAGTAACCGCAGGATGCTTCCTCCTATTACCTGCATTCTCTTCTTATGTATCTGCTTCAGTTCTTTCTCTTCTTCCATTAAAGCTTCCTTCTACAACCACACCTTGCCCCACCAGCATCCTTACCCTGAAGCTGTGATTCATGAAGTTCACAGGAGAGTCAATGTATCTCTTTCCCGGCGGGAACTACTCGCCGGCTCCGGAAAGGACCTCAGTAATGGCTGTCTCACCGGAAATCCAGTTGACGACTGCTGGCGATGCGACCCTAACTGGGCAGCAAACCGGCAGAAGCTCGCGGACTGTGGCATTGGGTTCGGCCGCGACGCCATGGGCGGAAAAGGCGGCCGGATCTACGTCGTCACTGACTCATCCGACTCCGACCCGGCGAATCCAACTCCGGGGACTCTTCGTTTCGGATGGGAGATGTATGCGATCGGCGGCAGTGCAAACCCCACCATCAACAGCCAAGGTAACCGTTATACGGCGCCGCCCAGTCCTGATGCTAAAGAGGTGACGAAGCGCGTGGACACAGACGAGAGGGAGTGGGCGGATTGGAACTGGAGGACGGAGGGTGACGTCATGGTGAACGGCGCCTTCTTTGTTCCGTCCGGCGGTGGCTTCAGCCCTCAGTACGCCAGAGCCTCCAGCGTCGACCCCAAGTCCGCCGTCCAGATCGACCAGCTCACCGGCAACGCCGGCGTGTTCGGCGATCCCAGGGATAATGGAGATCTGTTTCCCGGGTTCAGCGGCGGTGGGACCGTCACCGGCACCACCAGCACCGGCAACGTGGGGTCCAGCGGCGGCGACGATGGGGACTTCTTTGGAATGATATTCAAGGGTAGTGGTAGCAGCGAAGCAGCGCCACCCTCACTTTCCATTGTTTCAATCTGCTTGTCTATTCTCATCATTTCCATTTTGTACACTTTCACCAACCATGCCCTCCTATTATCTTCCATACTATGA 1053 0.5546 MLTKLRHNNGSLPVFQSGFMVAIPGSKVRNVSNRRMLPPITCILFLCICFSSFSSSIKASFYNHTLPHQHPYPEAVIHEVHRRVNVSLSRRELLAGSGKDLSNGCLTGNPVDDCWRCDPNWAANRQKLADCGIGFGRDAMGGKGGRIYVVTDSSDSDPANPTPGTLRFGWEMYAIGGSANPTINSQGNRYTAPPSPDAKEVTKRVDTDEREWADWNWRTEGDVMVNGAFFVPSGGGFSPQYARASSVDPKSAVQIDQLTGNAGVFGDPRDNGDLFPGFSGGGTVTGTTSTGNVGSSGGDDGDFFGMIFKGSGSSEAAPPSLSIVSICLSILIISILYTFTNHALLLSSIL 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g2660 350 MobiDBLite consensus disorder prediction 184 207 - -
Lele07g2660 350 PRINTS Pollen allergen Amb family signature 131 148 IPR018082 -
Lele07g2660 350 PRINTS Pollen allergen Amb family signature 155 180 IPR018082 -
Lele07g2660 350 PANTHER PECTATE LYASE 18-RELATED 170 265 IPR045032 GO:0030570
Lele07g2660 350 SUPERFAMILY Pectin lyase-like 109 168 IPR011050 -
Lele07g2660 350 Gene3D - 169 266 IPR012334 -
Lele07g2660 350 Gene3D - 108 168 IPR012334 -
Lele07g2660 350 SUPERFAMILY Pectin lyase-like 168 264 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g2660 Lele-ChrLele07 32142259 32146238 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g2660 170 271 Polysaccharide Lyase AT3G54920 72.816 9.10e-45 158