Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g2631 ATGGGCAATGTTGAAATTCCCAATTGGCTAAAAGGCTTGCCATTGGCTCCGGAATTTCGCCCAACTGATACTGAATTCGCCGACCCGATTGCTTACATTTCAAAGATTGAGAAAGAAGCTAGCGCCTTTGGGATATGTAAGATTATTCCGCCATTACCCAAGCCTTCTAAAAGATATGTCTTTTCTAATTTAAACAAGTCTCTTTTGAAGAGCCCGGAATTGGCTTTAGATAGTAATTCAGTTGGAGTTAGTAATTCTTTGAAAATTATTTCTGGGGATAGTGGTAGTGATGGGGAGGCTCGGGCTGTGTTTACCACAAGGCATCAAGAACTGGGGCAGAATATTAAAAGAAACAAAGGAACAATTCAAAGTCCACTTTCCGGTGTTCATAAGCAAGTATGGCAGAGTGGGGAAATTTATACACTTGAACAGTTTGAGTCTAAATCAAAGGCTTTTGCAAGAAGTGTACTAGGTATGGTTAAGGAGGTTTCTCCCCTGGTCATAGAGGCTATGTTTTGGAAGGCAGCTTCGGAGAAGCCTATATATGTGGAGTATGCCAATGATATCCCTGGGTCTGCTTTTGGAGAATCCAAGGGTCAGTTTCATTATATTCATAGAAGGAGAAGGAGAAAGGCTTATTATCAAAGGAGTCTAGATACCTCAGATTGCCAAGAACCCAAAATGGATAAAATAAGAGATACCCAGACGTGTGAAAGTAAGGATGCTTCTGCCCATAATCATGCAGACACTTGCTCACAGGCATCAAATTCAACTTCAAACCAGTCAACATTTTCGTCAAATGAAGCCCCACATTCTATTAGGCAGAAGAGTTCAGATTCCAGCAATGAGATGGAAGGTACTGCTGGTTGGAAGCTTTCAAACAGTCCTTGGAACTTACAAGTTATTTCACGTTCACAGGGCTCGCTAACTCGTTTCATGCCAGATGATATTCCTGGGGTCACTTCCCCCATGGTATACATTGGTATGCTGTTCAGTTGGTTTGCTTGGCATGTAGAGGATCATGAACTTCATAGCATGAATTTTCTTCACATTGGCTCGTCAAAGACTTGGTATGCTGTTCCTGGAGATTATGCCTTTGATTTTGAGGAACTCATCCGCACTGAGGCTTATGGTGGTGATATGGATCACTTAGCTGCTCTGACTCTGTTGGGGGAGAAGACAACCCTTATATCACCGGAGGCAGTTGTTGCATCTGGGATCCCTTGTTGCAAGTTGACGCAGAACCCTGGAGAATTTGTTGTGACCTTCCCAAGGGCCTATCATGTAGGATTCAGCCATGGTTTTAACTGCGGGGAAGCTGCTAACTTTGGAACTCCACAATGGCTCACAGTGGCCAAGGAAGCTGCAGTGCGTAGGGCTGCAATGAATTATCTTCCCATGCTTTCCCATCAACAACTGCTTTACTTATTGACTATGTCTTTTGTTTCAAGAGTGCCAAGAACATTATTACCAGGTGTGCGGAGTTCCCGTCTGAGAGACCGTCAAAAAGAAGAAAGAGAATTGTTAGTAAAAAGATCTTTTATAGAAGATATGCTGCAAGAAAACAATCTGCTATCCATTCTTGGAAAGCAATCAACTTATCATGCTGTTTTATGGAATGCCAATTTACTCCCAGATTCGAGCAAGGATTCTCCTCAGTTGCCTGACTTTACTTTTACAACTAGAACCTCTATGGCAGAAAATGTGTCAAATTTGAGTCCTACAGATAAGAGCAACCACAGTTGTCTGCTTGATGAAATGAGCTTGTATATGGAGAATCTGACTGAACTTTATCTTTGTGACGACAGTCTTCCATGTCACTTCCAAACTGATTCAGGAGCATTGGCTTGTGTGAGTTGTGGGATTCTTGGTTTTCCATTCATGACTGTGGTACAACCATCGGAGAGATCAGCGATGGAACTTTTGCCAGTCTCAGGGAATGCTCTCTCTGTTACTGATCCACCTTCAACAAATGAACCATCAAAACTATCATTAATGAACCGTGACAAGGGTTGGAACACCTCTTGCAAATTTTTGAGGCCACGAATTTTCTGCCTGGAGCATGCTGTTCAGATTATGGAGATGCTGCAGTGTAAAGGTGGAGCTAGTGTGCTTGTAATTTGCCATTCAGACTACCAGAAAATCAAGGCACATGCTAGGACAGTAGCAGAGGAGATAGGCTGTGCTTTTGATTATAAGGAGGTTCCATTAGATACAGCGTCCCCTGAAGATTTGACCTTGATAGATCTTGCGATTGATGGTGAAGAACACAAAGAATGTGAAGAAGACTGGACATCTAAATTAGGAATTAACCTGGGACATTGTGTCAGTGCAAGAAAGAACTCTCCATATAAACAAGCTCCTTTCAAATTGGCACTGGGAATGTTGTTCCCTGAAAAATTTCCTGATTCAGATGTCTTGTCTGTAAATTGGCAGTCAAAGAGATTTCGCTCCAGAAGGTTGAAGTATTTGGCTCAGGCGAAACCATGTGATGGGATTCAGAGAAAGAAGGGTGATCAGTTGGAAGCAAAGACACATGGCTCCACTGCAAAAAAGATGCTTCAGTATTCAAGGAGAAAGTTCAGGTCAAAGCAAGGTTGTTTCTCTGGATCAAACATGGTTCATGTACCCCATAAAGAGTCCATAAATGTGCCAGCTGTCTTGAGTAGAGATTCTGGTAACCAGGTTTCTCAAAATGAGCCTGGCACTGAGAATTCTAGGAGTGATTGTGCACTGTCATGTGTCTTGCAACCTGAAAACCAACTTACTGAAATGACCACTAGTATGAGTTTGAAAGTTGCTTCTTCACAACCTTCAGATTTCACTCTGGAACCCATGTCAGTGGATGAAAATGCGGGACCAGAGGTCCAGAATCAAACTACAAAGGAATTAAAAATCGATGACAAAAGTAATTGCACAACACCTGATCATTCTATGATGCCTTGTAAGATGGGTGCCTCAGAAATTGATAATAAGGACAATGAGATTTTGCATGACAAGATAAATTCTAGCTCACTTACTGTTGCTAAAGACAAAAATAATGACATGCTTACTGAGAACCTTATCACAGAAGCAATTAACACCAACTATAGCAGTAGTGTGGATTTTAATGAAGTACATCAAGAATTTGAGTCTACCCATAAGAGTAACAGGGTGGAACCTACTTCATCTCCTGTTTCATCGGTAACTCAGCAGACACTTGCCTTCATGGAAGAAAATTCTGATAGTGCTAGAAATAATCATAGCACTGAAAGCATGAGCTATGGTGCATCCTTAAAAGAGACAACGGGCACTTCTAGTTTGAATGAAAACAACATGGAACTTACTGTAAGTTGTGATAAATCAATAAATGAGCAGACGTCAAAGATTGATGCTCTTGAAGTTCCAAAAGAGCTTTGTGCCCCTGCAGACTCCAGTCCTCAATCTACTTCAGATGTGAGAAAAGAACTGGAAATCGAGCCAAGAATCATGAATGATGAGGAAATTTGTTCTGGTACTGGTGCTGGGCCATCATTAAAGGACTCTTCTGTGTCAATCCTGGAGTGTTCTGCAACTGAGGGAGAGAAATGTGCTAGAGATAGCTTAAATGGAAGCGAAGTTCATTTTTCACAAGACGATAGGGAGCTGCTGAGCTCTGAAAGTTCGCCAGGTGTGAGGTCCAATACCCAGAAGAAAAGAAACAGGGAATTGGAACAGATACAAGAGATCAATGTAAGTTTCCATGGCTTTGTTAGAAGTCCATGTGAAGGATTGAGACCGAGGGCTTGTAAAGCAGCCTCTGACAGAAGCATGGCTGAAACCAGCAATTCTGTGGAGGAAAATCTGGAGGTTAAAAGGGCTAGGAGGAAATCATCAGATGTCGTGTTGTGTGGCAAGAATAAGGCGGATGCTGTCAAGAGGTCTCACAAGTGCGACCTTGATGGTTGCCATATGAGTTTTATGACCAAAGCAGATTTAATGTTGCACAAGCGCAACCGCTGCCCTCTTGATGGGTGTGGAAAGAAGTTCAGATCCCACAAATATGCCGTGCTTCACCAACGTGTCCATGATGAGGACAGGCCCCTCAAGTGCCCATGGGAAGGTTGCTCAATGTCATTCAAGTGGGCATGGGCGAGGACTGAGCATATACGGGTGCATACTGGGGAAAAGCCATACCACTGCAAGGTTGAGGGATGTGGCCTTTCATTCAGATTTGTATCCGATTATAGTAGGCACCGGCGGAAAACGGGGCACTATGTATAG 4242 0.4267 MGNVEIPNWLKGLPLAPEFRPTDTEFADPIAYISKIEKEASAFGICKIIPPLPKPSKRYVFSNLNKSLLKSPELALDSNSVGVSNSLKIISGDSGSDGEARAVFTTRHQELGQNIKRNKGTIQSPLSGVHKQVWQSGEIYTLEQFESKSKAFARSVLGMVKEVSPLVIEAMFWKAASEKPIYVEYANDIPGSAFGESKGQFHYIHRRRRRKAYYQRSLDTSDCQEPKMDKIRDTQTCESKDASAHNHADTCSQASNSTSNQSTFSSNEAPHSIRQKSSDSSNEMEGTAGWKLSNSPWNLQVISRSQGSLTRFMPDDIPGVTSPMVYIGMLFSWFAWHVEDHELHSMNFLHIGSSKTWYAVPGDYAFDFEELIRTEAYGGDMDHLAALTLLGEKTTLISPEAVVASGIPCCKLTQNPGEFVVTFPRAYHVGFSHGFNCGEAANFGTPQWLTVAKEAAVRRAAMNYLPMLSHQQLLYLLTMSFVSRVPRTLLPGVRSSRLRDRQKEERELLVKRSFIEDMLQENNLLSILGKQSTYHAVLWNANLLPDSSKDSPQLPDFTFTTRTSMAENVSNLSPTDKSNHSCLLDEMSLYMENLTELYLCDDSLPCHFQTDSGALACVSCGILGFPFMTVVQPSERSAMELLPVSGNALSVTDPPSTNEPSKLSLMNRDKGWNTSCKFLRPRIFCLEHAVQIMEMLQCKGGASVLVICHSDYQKIKAHARTVAEEIGCAFDYKEVPLDTASPEDLTLIDLAIDGEEHKECEEDWTSKLGINLGHCVSARKNSPYKQAPFKLALGMLFPEKFPDSDVLSVNWQSKRFRSRRLKYLAQAKPCDGIQRKKGDQLEAKTHGSTAKKMLQYSRRKFRSKQGCFSGSNMVHVPHKESINVPAVLSRDSGNQVSQNEPGTENSRSDCALSCVLQPENQLTEMTTSMSLKVASSQPSDFTLEPMSVDENAGPEVQNQTTKELKIDDKSNCTTPDHSMMPCKMGASEIDNKDNEILHDKINSSSLTVAKDKNNDMLTENLITEAINTNYSSSVDFNEVHQEFESTHKSNRVEPTSSPVSSVTQQTLAFMEENSDSARNNHSTESMSYGASLKETTGTSSLNENNMELTVSCDKSINEQTSKIDALEVPKELCAPADSSPQSTSDVRKELEIEPRIMNDEEICSGTGAGPSLKDSSVSILECSATEGEKCARDSLNGSEVHFSQDDRELLSSESSPGVRSNTQKKRNRELEQIQEINVSFHGFVRSPCEGLRPRACKAASDRSMAETSNSVEENLEVKRARRKSSDVVLCGKNKADAVKRSHKCDLDGCHMSFMTKADLMLHKRNRCPLDGCGKKFRSHKYAVLHQRVHDEDRPLKCPWEGCSMSFKWAWARTEHIRVHTGEKPYHCKVEGCGLSFRFVSDYSRHRRKTGHYV 1413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g2631 1413 SMART c2h2final6 1355 1379 IPR013087 -
Lele07g2631 1413 SMART c2h2final6 1385 1411 IPR013087 -
Lele07g2631 1413 SMART c2h2final6 1325 1349 IPR013087 -
Lele07g2631 1413 SMART c2h2final6 1302 1324 IPR013087 -
Lele07g2631 1413 SUPERFAMILY beta-beta-alpha zinc fingers 1365 1407 IPR036236 -
Lele07g2631 1413 SMART JmjN_1 15 55 IPR003349 -
Lele07g2631 1413 SMART cupin_9 291 460 IPR003347 -
Lele07g2631 1413 ProSiteProfiles Zinc finger C2H2 type domain profile. 1385 1413 IPR013087 -
Lele07g2631 1413 ProSiteProfiles JmjC domain profile. 291 460 IPR003347 -
Lele07g2631 1413 MobiDBLite consensus disorder prediction 234 291 - -
Lele07g2631 1413 MobiDBLite consensus disorder prediction 1202 1228 - -
Lele07g2631 1413 MobiDBLite consensus disorder prediction 246 291 - -
Lele07g2631 1413 ProSiteProfiles JmjN domain profile. 16 57 IPR003349 -
Lele07g2631 1413 MobiDBLite consensus disorder prediction 1041 1063 - -
Lele07g2631 1413 FunFam Probable lysine-specific demethylase ELF6 1352 1381 - -
Lele07g2631 1413 Pfam JmjC domain, hydroxylase 324 443 IPR003347 -
Lele07g2631 1413 SUPERFAMILY beta-beta-alpha zinc fingers 1325 1362 IPR036236 -
Lele07g2631 1413 ProSitePatterns Zinc finger C2H2 type domain signature. 1387 1411 IPR013087 -
Lele07g2631 1413 ProSitePatterns Zinc finger C2H2 type domain signature. 1357 1379 IPR013087 -
Lele07g2631 1413 PANTHER LYSINE-SPECIFIC DEMETHYLASE 8 1350 - -
Lele07g2631 1413 Gene3D Cupin 9 464 - -
Lele07g2631 1413 ProSiteProfiles Zinc finger C2H2 type domain profile. 1355 1384 IPR013087 -
Lele07g2631 1413 SUPERFAMILY Clavaminate synthase-like 284 457 - -
Lele07g2631 1413 ProSitePatterns Zinc finger C2H2 type domain signature. 1327 1349 IPR013087 -
Lele07g2631 1413 ProSiteProfiles Zinc finger C2H2 type domain profile. 1325 1354 IPR013087 -
Lele07g2631 1413 Pfam jmjN domain 17 50 IPR003349 -
Lele07g2631 1413 Gene3D Classic Zinc Finger 1323 1409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g2631 Lele-ChrLele07 31800425 31807986 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g2631 1 860 C2H2 Transcription Factor Family AT5G04240 58.087 0.0 984
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lele07g2631 JmjC 7.4e-36 CL0029
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g2613 05 41962640 41971711 Lele07g2631 07 31800425 31807986 hybridization
Lele06g2595 06 33787406 33795217 Lele07g2631 07 31800425 31807986 hybridization