Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g2630 ATGATGAAGTTGAAGACCAAATTGTTCAGAAGAGAACTTGGTACATTATTGAGAGTTGTGAAATGGGTTAGGTTTTGTTGCTTTGAGGAAGAGGCAAACATACCAAAAGATGTTCCCAGAGGTCACATGGTTGTGTATGTGGGTGAGGATTGTAAGAGATATGTGATTAGGGTTTCTGCGGTGAACCATCCACTGTTCAAGGCGTTGCTTGATCATGCTGAGGATGCTTTTGGATTCACGAATGCCTCTAATAAACTCCACATTCCTTGCAGTGAGAGGATTTTTCTAAGCATCCTTCATAATGCTTCTCTTCTTCAACATTGA 324 0.4074 MMKLKTKLFRRELGTLLRVVKWVRFCCFEEEANIPKDVPRGHMVVYVGEDCKRYVIRVSAVNHPLFKALLDHAEDAFGFTNASNKLHIPCSERIFLSILHNASLLQH 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g2630 107 Pfam Auxin responsive protein 30 99 IPR003676 GO:0009733
Lele07g2630 107 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 35 99 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g2630 Lele-ChrLele07 31786172 31786495 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g2630 12 99 Calmodulin-binding Proteins AT4G34750 38.710 2.04e-17 70.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g2612 05 41949954 41950280 Lele07g2630 07 31786172 31786495 hybridization