Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g2624 ATGTTTCTGGTTATGGATGAGAGGGTTTCGTCGGAGAAGTGCTTGGATTCTCAATTATGGCATGCCTGCGCCGGTGCGATGGTTCAAATGCCACCAATGAATTCGAAGGTCTTCTACTTCCCTCAGGGCCACGCAGAGCACGCTCAGGGGAAGGTAGATTTGGGATTGTCGTCGACACGAATTTCTCCTTTCATTCCTTGCAGGGTTTCTGGTATGAAATACATGGCAGACCCTGACACAGATGAGGTGTTTGTGAAAATGAGACTAACCCCTCTAAGAGATAATGAGATGGCCTTTGAAGATGACACTTTTCTGGGGAACCATGGAGTTGAGAATCAAGAAAAGCCAGCTTCTTTTGCTAAGACATTGACTCAATCTGATGCCAATAACGGTGGAGGTTTCTCTGTTCCTCGTTACTGTGCAGAGACCATCTTCCCCAGGTTGGATTATTCTGCAGAACCACCAGTTCAAACCATTATTGCCAAAGATGTGCACGGGCAGAACTGGAAGTTTAGGCATATCTATAGAGGGACACCTCGCCGGCACCTTTTAACAACCGGGTGGAGCAATTTCGTGAACCAGAAGAGGCTTGTTGCTGGGGATTCTATTGTGTTCTTGAGGGCTGAGAATGGAGATCTCTGCGTCGGAATAAGGAGGGCTAAGAAGGAAATTGGTGGTGGAATTGAGTATCCAACTGGTTGGAATCAGGCAGTTCCATCACTATTTGGTGGGAATTCGGGTTTTATGCGTGAAGATGAGAACTCATTGTTGAGGAGAAAATCTCATGAGGAGGTGAAGGGAAGAGTGACTGCTGAATCTGTTATTGAAGCTGTGACTTCTGCTGTTAATGGCAGGCCCTTTGAGGTCGTGTACTATCCTCGAGCTAGCACGCCGGAGTTCTGTGTTAAGGCCTCGTCGGTAAGGGCTGCAATGCAAATACAGTGGTGTTCTGGGATGAGATTCAAAATGCCTTTTGAAACTGAGGATTCCTCCAGGATCAGCTGGTTCATGGGCACAATATCTTCTGTTCAAGTTGCTGATCCGATTCGTTGGCCTGATTCTCCGTGGCGTCTTCTTCAGGTAGCGTGGGATGAACCAGATTTGCTTCAGAATGTTAATAGTGTAAACCCTTGGTTGGTTGAACTAGTGTCGAATATGCCAACTTTCCATCTCTCTCCGTTCTCGCCACCGAGGAAGAAATCGCGGTTTCTACAGCATCCGGAATTTCCTCTCCTCAGTCAGCTTCCTATGCCACCGTTCTCCTCTGGAAACCTCCTCAATCAAACTAACAACTCCCCTTGTAACGTTCATGACAGTTATAGTCCTGCGGGCATACAGGGAGCCAGGCATGCTCAATATGGTCTCTCTCCATGTGATTTCCCTTTCCACAAGCTGCAATCAGATATGCTTCTTGGCAAACTTCCGAGGCTCGACCACGCTGTCCAGCCTCCAAGACCTCCTCGTAGCGCCTACAATATCGGCCTGCAGAACAACGCCGAGATATCGTGCCTGTTGACCATGGGAAATCCTGGCCCGAGCTTGAAGGAACCGGTGGATACCAAAACACCCCATATTCTGTTGTTTGGTCAACGCATTCACACTGAACAGCAGAGTTCAAACAGTAGCTCTGCTAGTACAACTGAGAATAGTTCATCCAAAGGTACTTCCCAGAAGGCATCCAATGTTGTTTCCGACGGCTCGGGTTCTGCTTTGCACCGAAAAAGTCCTACAGAGAATTCTTCAGAAGGAGGGTCTCCCTGGTACAAAGATCAGCAAAGTTCTGAAATCGGAACCGAAAACGTTAACCTCTTGTGTTTGGCTTTATGA 1827 0.4773 MFLVMDERVSSEKCLDSQLWHACAGAMVQMPPMNSKVFYFPQGHAEHAQGKVDLGLSSTRISPFIPCRVSGMKYMADPDTDEVFVKMRLTPLRDNEMAFEDDTFLGNHGVENQEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTIIAKDVHGQNWKFRHIYRGTPRRHLLTTGWSNFVNQKRLVAGDSIVFLRAENGDLCVGIRRAKKEIGGGIEYPTGWNQAVPSLFGGNSGFMREDENSLLRRKSHEEVKGRVTAESVIEAVTSAVNGRPFEVVYYPRASTPEFCVKASSVRAAMQIQWCSGMRFKMPFETEDSSRISWFMGTISSVQVADPIRWPDSPWRLLQVAWDEPDLLQNVNSVNPWLVELVSNMPTFHLSPFSPPRKKSRFLQHPEFPLLSQLPMPPFSSGNLLNQTNNSPCNVHDSYSPAGIQGARHAQYGLSPCDFPFHKLQSDMLLGKLPRLDHAVQPPRPPRSAYNIGLQNNAEISCLLTMGNPGPSLKEPVDTKTPHILLFGQRIHTEQQSSNSSSASTTENSSSKGTSQKASNVVSDGSGSALHRKSPTENSSEGGSPWYKDQQSSEIGTENVNLLCLAL 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g2624 608 Gene3D - 117 221 IPR015300 -
Lele07g2624 608 SUPERFAMILY DNA-binding pseudobarrel domain 105 221 IPR015300 -
Lele07g2624 608 ProSiteProfiles B3 DNA-binding domain profile. 119 221 IPR003340 GO:0003677
Lele07g2624 608 Pfam B3 DNA binding domain 119 220 IPR003340 GO:0003677
Lele07g2624 608 SMART B3_2 119 221 IPR003340 GO:0003677
Lele07g2624 608 MobiDBLite consensus disorder prediction 533 596 - -
Lele07g2624 608 Pfam Auxin response factor 277 360 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Lele07g2624 608 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 12 561 IPR044835 GO:0003677|GO:0006355|GO:0009725
Lele07g2624 608 Gene3D - 314 388 - -
Lele07g2624 608 FunFam Auxin response factor 315 388 - -
Lele07g2624 608 FunFam Auxin response factor 117 221 - -
Lele07g2624 608 CDD B3_DNA 118 219 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g2624 Lele-ChrLele07 31688328 31690536 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g2624 11 547 B3 DNA Binding Superfamily AT4G30080 61.243 0.0 620
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Lele07g2624 B3 4.4e-22 CL0405