Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g2560 ATGACATCACCCCGCCAGTTTTCTGAGAGATGTTCAATGGAGGATATGGATCAATCATGGGTCCCTCCAGGATTTAGATTTCATCCAACAGAGGAGGAACTTGTAGGATATTACCTCAAGAGGAAGATAAACTCTCTCAAAATCAACTTAGATGTCATTGTTGAGCTAGATCTCTACAAAATGGAACCATGGGACATACAAGATAGCTGCAAGCTAGGATATGAGGAGCAGAACGAGTGGTATTTTTTCAGCCACAAGGACAAGAAGTATCCAACAGGGACAAGAACGAATAGGGCAACAGCAGCAGGATTCTGGAAAGCAACAGGGAGAGACAAAGCAGTGATGTCGAAGAACAAGATCATAGGTATGAGGAAGACCCTTGTCTTCTACCAAGGTCGTGCCCCTAATGGCCGGAAATCCGACTGGATCATGCATGAATATCGCCTTCAATCTTCCGAGCATGCCCCTTCTCAGGAAGAAGGTTGGGTAGTGTGCCGAGCATTCAAAAAGCCAAGTCCTAGTCATCATGTGGGGCCAGGTTTTGAAGCACAGTGCTATTTCAGAGATCAGATCAGCAGCCATGGAAGGCCCTTGATCTCTTCATTTTCTGAGATTCTGAATCAAACCCATCATTTTCTGAATAACAATAACTCTCATCATCAAGGTACAAACCTAAGTCCTCATCATCACCAACCTTTAATCAGCTTGTATCAGCAGAACCAACAACTTGTTGATCTTCCTCAACTAGATAGCCCAAGTCTAGGAATAAGATCATCATCAGATAACTATGGTGGACAAAACAACATTAATCTTGGGGAAGAATATTACAGTGATGACGTGGAAAGCTTGGACCATTTCTTTGCTACCAATCTGACAGATACAACTTCTTCTGCTGCTGCTGCTGCTTTCTTTGCCATGAACATGGTACCACATAACAACGAACTAGTAATACCTCATCACAATCATCAAGCAAGCCAAGCCCTAGGAATCTGCTTTCCTGATTCATAG 1008 0.4325 MTSPRQFSERCSMEDMDQSWVPPGFRFHPTEEELVGYYLKRKINSLKINLDVIVELDLYKMEPWDIQDSCKLGYEEQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAVMSKNKIIGMRKTLVFYQGRAPNGRKSDWIMHEYRLQSSEHAPSQEEGWVVCRAFKKPSPSHHVGPGFEAQCYFRDQISSHGRPLISSFSEILNQTHHFLNNNNSHHQGTNLSPHHHQPLISLYQQNQQLVDLPQLDSPSLGIRSSSDNYGGQNNINLGEEYYSDDVESLDHFFATNLTDTTSSAAAAAFFAMNMVPHNNELVIPHHNHQASQALGICFPDS 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g2560 335 Pfam No apical meristem (NAM) protein 22 149 IPR003441 GO:0003677|GO:0006355
Lele07g2560 335 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 18 241 - -
Lele07g2560 335 ProSiteProfiles NAC domain profile. 21 170 IPR003441 GO:0003677|GO:0006355
Lele07g2560 335 FunFam NAC domain-containing protein 30 174 - -
Lele07g2560 335 Gene3D NAC domain 30 173 IPR036093 GO:0003677|GO:0006355
Lele07g2560 335 SUPERFAMILY NAC domain 13 170 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g2560 Lele-ChrLele07 30980979 30985276 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g2560 13 335 NAC Transcription Factor Family AT1G71930 54.386 3.95e-109 319
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele07g2560 NAM 5.5e-37 No_clan