Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g2557 ATGCTGGGGAGACCTTTGACCTTGCCTGCACAATCTTCTTGTTGCGCGGTTGATCTTGCTGCTCCTCCACCGGCTATCATACCATCAAACACAAGTTTTTCGAGTAGACTCTTACCAAGTGTGACCAAAGCAGCATGGGCACCAAATGTTTCTATGAAGAAATGGACAATACATTCTGTACAGATAGATGATATGATCACAAGCAAAGAAGACCAGAGTATGTGGGAAGCCTGCAGACAAGCTCTTTCGACGTTTGATTTTAGTGTTGAAGAAAAAGACAAGATGCTTGAAAAAGCATTTGGCCTTGTTAATTCGGCATATTGGGGAGAAGAACGTGGGAAAGAAATTCCCAAATTTAAAACAGTGAATGGAGTATTAGAGTATCTGAGGAGTTTAAGTCTTTCTGATGAAGATTTGACCAAGCTGCTCAAGAAATTCCCTGAGGTTCTTGGATGCAGTTTAGAGAATGAGCTGAAAACCAATGTGAAAATCCTGGAAAGGGAATGGGGTATCAAAGGAAAGTCTCTTCGAAACCTGCTCCTTCGAAATCCGAAAGTTTTGGGTTACAATGTCGATTGTAAGGGAGACTGTATCGCACAATGCACTCGATGCTGGGCTCGTTTCTAG 627 0.4242 MLGRPLTLPAQSSCCAVDLAAPPPAIIPSNTSFSSRLLPSVTKAAWAPNVSMKKWTIHSVQIDDMITSKEDQSMWEACRQALSTFDFSVEEKDKMLEKAFGLVNSAYWGEERGKEIPKFKTVNGVLEYLRSLSLSDEDLTKLLKKFPEVLGCSLENELKTNVKILEREWGIKGKSLRNLLLRNPKVLGYNVDCKGDCIAQCTRCWARF 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g2557 208 FunFam uncharacterized protein LOC106769908 58 204 - -
Lele07g2557 208 Gene3D Transcription termination factor 3, mitochondrial 49 203 IPR038538 -
Lele07g2557 208 Pfam mTERF 121 190 IPR003690 GO:0003690|GO:0006355
Lele07g2557 208 SMART mt_12 140 172 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g2557 Lele-ChrLele07 30965135 30967325 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lele07g2557 mTERF 3.7e-09 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g2541 05 41186895 41188285 Lele07g2557 07 30965135 30967325 hybridization
Lele06g2522 06 33016509 33019440 Lele07g2557 07 30965135 30967325 hybridization