Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g2543 ATGGCTACTAAGCAAACCGATATGGTTAAGCCTTCTTCTCTGCAGGTTGAGCCTGCTGCATCTCTGCCGGAGTCCAGTCCTTTCCGGAAAATCGTCGTCGTTGCTTCCATTGCCGCCGGGATTCAATTTGGATGGGCTCTTCAGCTCTCCTTGTTGACTCCCTATGTCCAGCTTCTCGGTATTCCCCATACCTGGGCCGCTTTCATCTGGCTCTGTGGTCCCATCTCCGGTATGCTTGTTCAACCGATTGTTGGTTACCACAGTGACCGATGCACCTCCCGGTTCGGTCGCCGCCGTCCGTTCATCGCCGTCGGTGCGTTCGCCGTCGCTATCGCTGTTTTCTTGATCGGTTACGCTGCCGATATGGGCCACATGTTTGGTGACTCGTTGGAGAAGAAAACGCGTCCCCGAGCCATCGCGATCTTCGTCGTCGGATTCTGGATCCTCGACGTGGCCAATAACATGCTACAAGGCCCATGCCGAGCTCTATTAGCCGACCTCGCCGCCGGTGACCAGCGGAAGACGCGGACGGCGAACTCGTTCTTCTCGTTCTTCATGGCCGTCGGGAACGTCCTCGGGTACGCAGCCGGATCGTACAGTAAACTCCACAATATGTTTCCGTTCACGAAAACCAAAGCCTGCGACGTGTACTGCGCGAACCTGAAGAGTTGCTTCTTCCTCTCCATCGCTCTTCTGCTGGTTGTCTCAATCGCCGCTCTGACCTACGTGAAGGAGAAGGCCCTTGAGAAAGCAACTGGCGGGAACGAGGGGGAAAATGATTCCGTGGGCGAGGGATCAGGAGGATTCCAGTGCTTCGGACAAATGTTCGGTGCGTTCCGTGAGCTGAAGAGGCCCATGTGGATTTTACTCCTGGTGACGTGTCTCAACTGGATTGCTTGGTTCCCTTTCTTGTTGTTCGACACCGATTGGATGGGTAGGGAGGTGTACGGTGGGACGGTTGGGGAAGGTAGGGCGTACGATAAGGGAGTGCGCGCGGGTGCATTGGGTCTTATGCTCAACTCCGTTGTGCTTGGCGTGGTGTCGTTGGGCATGGAGGTGTTGGCGCGTGGGGTTGGTGGCGTGAAGAGGTTATGGGGAATCGTTAACTTCATTCTCGCCATATGTTTGGCCTTGACGGTGTTGATCACGAAGTTGGCCGAGCACTCACGGCAGTTCGCCCCCGGCTCTACCGATCCTCTGCCACCTTCCACCGGGGTTAAGGCCGGTGCGTTAACTCTCTTCGCGGTGCTCGGAATTCCACTGGCGATTACTTACAGTATCCCTTTTGCACTAGCATCCATATTCTCCAGCTCTTCAGGGGCAGGCCAAGGGTTATCTTTGGGCGTTCTTAATCTGGCAATTGTCATCCCACAGATGTTTGTGTCTGTGGTGAGTGGACCATGGGACGCAGCGTTCGGTGGTGGTAACCTACCGGCGTTTGTGGTGGGCGCCATCGCCGCTGCAATCAGCGGTATATTATCGATAGTTTTGTTGCCTTCTCCACCACCGGACTTGGCAAAGACGATGAACACGGCTGGAGGCTTCCATTAG 1551 0.5551 MATKQTDMVKPSSLQVEPAASLPESSPFRKIVVVASIAAGIQFGWALQLSLLTPYVQLLGIPHTWAAFIWLCGPISGMLVQPIVGYHSDRCTSRFGRRRPFIAVGAFAVAIAVFLIGYAADMGHMFGDSLEKKTRPRAIAIFVVGFWILDVANNMLQGPCRALLADLAAGDQRKTRTANSFFSFFMAVGNVLGYAAGSYSKLHNMFPFTKTKACDVYCANLKSCFFLSIALLLVVSIAALTYVKEKALEKATGGNEGENDSVGEGSGGFQCFGQMFGAFRELKRPMWILLLVTCLNWIAWFPFLLFDTDWMGREVYGGTVGEGRAYDKGVRAGALGLMLNSVVLGVVSLGMEVLARGVGGVKRLWGIVNFILAICLALTVLITKLAEHSRQFAPGSTDPLPPSTGVKAGALTLFAVLGIPLAITYSIPFALASIFSSSSGAGQGLSLGVLNLAIVIPQMFVSVVSGPWDAAFGGGNLPAFVVGAIAAAISGILSIVLLPSPPPDLAKTMNTAGGFH 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g2543 516 FunFam Sucrose transport protein 25 498 - -
Lele07g2543 516 TIGRFAM GPH_sucrose: sucrose/H+ symporter 27 503 IPR005989 GO:0005886|GO:0008515|GO:0015770
Lele07g2543 516 PANTHER SUGAR TRANSPORTER 27 497 - -
Lele07g2543 516 Gene3D MFS general substrate transporter like domains 26 504 IPR036259 -
Lele07g2543 516 CDD MFS_SLC45_SUC 31 493 - -
Lele07g2543 516 Pfam MFS/sugar transport protein 40 249 - -
Lele07g2543 516 SUPERFAMILY MFS general substrate transporter 31 503 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g2543 Lele-ChrLele07 30837670 30839948 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g2543 21 516 Sucrose Transporter Gene Family AT1G71890 69.661 0.0 699
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g2530 05 41074759 41077180 Lele07g2543 07 30837670 30839948 hybridization
Lele06g2510 06 32903584 32905993 Lele07g2543 07 30837670 30839948 hybridization