Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g2540 ATGGCTGATTCATCTTCTTCTTCCTCTGCTTCTTCTCACAAACCGTGGGATCCCTCTTCCGATTCTCCCCCAACAATTTCTCTCACCCCTGATCAGCTCAAGCACTGTACTGAAGCGCTCGCCAGCTTGATGGAGAGAACGCCGAAGTTGATCGATCAAGAGTTCTCCCACTTGGAGGCCAATGTGATAACACTAAGTGAGCTGAGGAGCAGATGCACCGTAGCTCTAAATGACGTAAATCTGAACAAAAATCGGTATCCGGAATTTGTCCTTCCATTTGACGATAACAGGGTTGTTCTGGAATCAAGTGCAGATCATAGACCTATGGCCATTGGATATATCAACGCAAGCTTTCTATCGACCTCTTCGTCTGAGAGTGTTTCTCAGTTCATAGCTACACAAGGTCCACTGCCACATACATGTGAGGATTTCTGGGAAATGGTAATCCAATACCGCTGCCCCGTCATTGTGAATCTCACTGCGCTCGTTGAACATAACAAGATTGTAAAATGTGACGATTATTTTCAAGCTGAAGGTGGACCTATGAAGTTTGGGAATATCTCTGTTGTTTGTGAGTGGATGAAAACTGCTGAAAACTCATTGGTACTGCGCCATTTGAAGGTGCATAGAAAGGAAGATCCGCCCTTTTCTGTTCTGCACATCCATTATCCTGAGTGGCCTGACTATGGAGTTCCCAATGATACACATACTGTGCGTGCAATTTTTAAGAGATTGTACCATTTACCACCAAAACTTGGCCCAATAGTGGTGCACTGCAGTGCAGGTATTGGCAGAACTGGAGCATACTGTGCTGTTCATAATACAATTCAGAGAATCCTTGTTGGGGATAAGTCTGCCTTGGATCTTTGTAACACCATATCTGTCATCAGGTCGCAGCGATTTGGAATGGCTCAGAAACAGAGCCAGTACAATTTCTGCTATGAAGCTACTGTAGATGCTCTGGGTGAACTTGTTTCTAATAATCAGCAATGA 993 0.4451 MADSSSSSSASSHKPWDPSSDSPPTISLTPDQLKHCTEALASLMERTPKLIDQEFSHLEANVITLSELRSRCTVALNDVNLNKNRYPEFVLPFDDNRVVLESSADHRPMAIGYINASFLSTSSSESVSQFIATQGPLPHTCEDFWEMVIQYRCPVIVNLTALVEHNKIVKCDDYFQAEGGPMKFGNISVVCEWMKTAENSLVLRHLKVHRKEDPPFSVLHIHYPEWPDYGVPNDTHTVRAIFKRLYHLPPKLGPIVVHCSAGIGRTGAYCAVHNTIQRILVGDKSALDLCNTISVIRSQRFGMAQKQSQYNFCYEATVDALGELVSNNQQ 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g2540 330 MobiDBLite consensus disorder prediction 1 30 - -
Lele07g2540 330 Gene3D Protein tyrosine phosphatase superfamily 25 325 IPR029021 -
Lele07g2540 330 SMART PTPc_3 50 322 IPR000242 GO:0004725|GO:0006470
Lele07g2540 330 FunFam Tyrosine-protein phosphatase non-receptor type 12 30 328 - -
Lele07g2540 330 ProSitePatterns Tyrosine specific protein phosphatases active site. 257 267 IPR016130 GO:0016311|GO:0016791
Lele07g2540 330 Pfam Protein-tyrosine phosphatase 80 318 IPR000242 GO:0004725|GO:0006470
Lele07g2540 330 PRINTS Protein tyrosine phosphatase signature 303 313 IPR000242 GO:0004725|GO:0006470
Lele07g2540 330 PRINTS Protein tyrosine phosphatase signature 130 150 IPR000242 GO:0004725|GO:0006470
Lele07g2540 330 PRINTS Protein tyrosine phosphatase signature 254 272 IPR000242 GO:0004725|GO:0006470
Lele07g2540 330 PRINTS Protein tyrosine phosphatase signature 216 233 IPR000242 GO:0004725|GO:0006470
Lele07g2540 330 PRINTS Protein tyrosine phosphatase signature 287 302 IPR000242 GO:0004725|GO:0006470
Lele07g2540 330 PRINTS Protein tyrosine phosphatase signature 112 119 IPR000242 GO:0004725|GO:0006470
Lele07g2540 330 ProSiteProfiles PTP type protein phosphatase domain profile. 51 320 IPR000242 GO:0004725|GO:0006470
Lele07g2540 330 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 253 311 IPR000387 GO:0016311|GO:0016791
Lele07g2540 330 PANTHER RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE 30 321 - -
Lele07g2540 330 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 18 320 IPR029021 -
Lele07g2540 330 SMART ptp_7 217 319 IPR003595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g2540 Lele-ChrLele07 30786128 30791574 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g2540 31 326 Protein tyrosine phosphatase (PTP) family AT1G71860 60.333 1.96e-129 371