Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g2533 ATGCCATCCATAACCATAAATTCTTATGTGAAAGAAATGGAAAAGTCAGATGAAGTTTCGGATTTGGAGTGGATTCGTCAACATCTTCTTGGTGAGTTTCCGTTCTCAGAATCCTTCTTATCCAATATGTATCCTGTAAAGCTCGAGGATTCTTCGTCGGAGTTTGATCTGAGTCCGCGTGTTCCGGGGCAAAGTTTCTGTTCTTCTGGTGAAACTTTTGGTTTTGAAGATGTGGAGGTTTTGATGAACTCCGTGTCGGTGGTCGAAATGGAGAAGAAGAAGCCCACGTCATCGGCTGAGACTGATGAGAAGACCGACGAGTGGGATGAGACGGTTATGATGAGGCAGTACAGGGGCGTTCGGAAGAGGCCGTGGGGCAAGTTTGCGGCGGAGATCCGTGACCCAACCCGGAAAGGGACACGGGTTTGGCTGGGTACGTTTGATAGTGAGATTGATGCCGCGAAGGCTTATGACTGTGCTGCGTTCAGAATGAGGGGTCGAAGGGCAATATTGAACTTTCCTCTGCTGGCCGGTGAATCTGATCCTACGCCGAACCGTTGTAGCCGGAAAAGGAGAAGACAAAGCTCACCGGAGGCGGAGGAGCTGTCCCAAATTTCCACTGAGATTTAA 630 0.4937 MPSITINSYVKEMEKSDEVSDLEWIRQHLLGEFPFSESFLSNMYPVKLEDSSSEFDLSPRVPGQSFCSSGETFGFEDVEVLMNSVSVVEMEKKKPTSSAETDEKTDEWDETVMMRQYRGVRKRPWGKFAAEIRDPTRKGTRVWLGTFDSEIDAAKAYDCAAFRMRGRRAILNFPLLAGESDPTPNRCSRKRRRQSSPEAEELSQISTEI 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g2533 209 MobiDBLite consensus disorder prediction 176 209 - -
Lele07g2533 209 CDD AP2 116 174 IPR001471 GO:0003700|GO:0006355
Lele07g2533 209 Gene3D AP2/ERF domain 115 176 IPR036955 GO:0003700|GO:0006355
Lele07g2533 209 PANTHER DNA-BINDING DOMAIN 94 193 IPR044808 GO:0003700|GO:0009873
Lele07g2533 209 SUPERFAMILY DNA-binding domain 116 175 IPR016177 GO:0003677
Lele07g2533 209 Pfam AP2 domain 116 166 IPR001471 GO:0003700|GO:0006355
Lele07g2533 209 FunFam Ethylene-responsive transcription factor 2 115 175 - -
Lele07g2533 209 ProSiteProfiles AP2/ERF domain profile. 116 174 IPR001471 GO:0003700|GO:0006355
Lele07g2533 209 SMART rav1_2 116 180 IPR001471 GO:0003700|GO:0006355
Lele07g2533 209 PRINTS Ethylene responsive element binding protein signature 156 176 IPR001471 GO:0003700|GO:0006355
Lele07g2533 209 PRINTS Ethylene responsive element binding protein signature 117 128 IPR001471 GO:0003700|GO:0006355
Lele07g2533 209 MobiDBLite consensus disorder prediction 184 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g2533 Lele-ChrLele07 30737799 30738538 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g2533 13 204 AP2-EREBP Transcription Factor Family AT5G07580 43.269 2.74e-44 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele07g2533 AP2 1e-13 CL0081